PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388724.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 261aa MW: 28986.7 Da PI: 8.999

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.7e-20	44	89	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v q+G ++W++++r+++ gR++k+c++rw + XP_026388724.1 44 KGPWSAEEDKILTRLVDQHGARNWSLVSRHIP-GRSGKSCRLRWCNQ 89 79****************************.*********985 PP
2	Myb_DNA-binding	53.8	4.4e-17	98	140	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ Ede+++da +++G++ W+tIar ++ gRt++ +k++w++ XP_026388724.1 98 PFSLSEDEIILDAQAKYGNR-WATIARLLP-GRTDNAVKNHWNST 140 79999*************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEPPNTSYSS TNSVCSSSSS ESDSMLLGSG KHTSLIGSKS ERIKGPWSAE EDKILTRLVD 60 QHGARNWSLV SRHIPGRSGK SCRLRWCNQL SPNVEHRPFS LSEDEIILDA QAKYGNRWAT 120 IARLLPGRTD NAVKNHWNST LKRKQRQPQH HHRRQCSNGS NCSTDNYNNN NGESFSNNNN 180 TTTGFMLSST ESDPPTNLTL APPGSSYFAA PESRQTSASS RNENVPGDGF WDAMRDVIAR 240 EVRNYVSTSF TSSTETSSRF P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-53	MYB family protein