PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388314.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 388aa MW: 43705.6 Da PI: 4.6237

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.5e-52	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd el+ +yL++kv+gk l++ evi+e+d+yk+ PwdLp k vk+++ ewyfF++rdkkya+g+r nrat++gyWk+tg+d++++ XP_026388314.1 6 LPPGFRFHPTDVELLLYYLRRKVSGKALSF-EVIAELDVYKFAPWDLPdKsIVKSRDLEWYFFCPRDKKYASGTRMNRATENGYWKTTGRDRDIC 99 79************************99.99**********96435666777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vg kktLvf+ grap+g +t+Wvmheyrl XP_026388314.1 100 N-NSRCVGWKKTLVFHVGRAPRGDRTNWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MARGSLPPGF RFHPTDVELL LYYLRRKVSG KALSFEVIAE LDVYKFAPWD LPDKSIVKSR 60 DLEWYFFCPR DKKYASGTRM NRATENGYWK TTGRDRDICN NSRCVGWKKT LVFHVGRAPR 120 GDRTNWVMHE YRLDDKNLVD AGICQDAYVL CKFFEKSGAG PKNGEQHGAP FKEEDWEDDE 180 VTNAPEYFQS VVPVTSPAMP FSGQNSTCCS SSVAVTCQSN LSNPEIANSP FLEDDIERMM 240 EFFKDDDTLL NDGTGNDKRP DPSTFEATVE APVLGDGFDI YNGLEDLKSC TRQQLTDNFL 300 LVNSPGDDFF LNQTPAGDDL CFLELDDLAH PLNFPEGVPG AERSQVQNHP DQYRSCDNVG 360 ALWNFPSAPS NTLRNFPSAP SNTHHTKL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MARGSLPPGF RFHPTDVELL LYYLRRKVSG KALSFEVIAE LDVYKFAPWD LPDKSIVKSR  60
DLEWYFFCPR DKKYASGTRM NRATENGYWK TTGRDRDICN NSRCVGWKKT LVFHVGRAPR  120
GDRTNWVMHE YRLDDKNLVD AGICQDAYVL CKFFEKSGAG PKNGEQHGAP FKEEDWEDDE  180
VTNAPEYFQS VVPVTSPAMP FSGQNSTCCS SSVAVTCQSN LSNPEIANSP FLEDDIERMM  240
EFFKDDDTLL NDGTGNDKRP DPSTFEATVE APVLGDGFDI YNGLEDLKSC TRQQLTDNFL  300
LVNSPGDDFF LNQTPAGDDL CFLELDDLAH PLNFPEGVPG AERSQVQNHP DQYRSCDNVG  360
ALWNFPSAPS NTLRNFPSAP SNTHHTKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	4e-89	NAC family protein