PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388138.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 649aa MW: 74477.7 Da PI: 7.3207

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.2e-20	57	142	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y++Y+k++GFsv+k++++k+ +g+ + tf+C +eg+++++ ++ r++++ + gCka+l +++ g we++ l leHnHel+p XP_026388138.1 57 CYKNYGKHMGFSVKKKSNRKN-VEGNLRSVTFCCAREGTPKTTARN---PLRPHVSMQSGCKARLSARLNMVGGWEISVLALEHNHELNP 142 7*************99998.7888************9988...999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MEGVSVSSAN DATVVAVFAD KAVTKETRVE SGELHGNAES EPKIGLTFDG IEEMFECYKN 60 YGKHMGFSVK KKSNRKNVEG NLRSVTFCCA REGTPKTTAR NPLRPHVSMQ SGCKARLSAR 120 LNMVGGWEIS VLALEHNHEL NPSISRFVQY HRKPKRKDRG GDKISTSSVN EAGGNEKDSG 180 NMIEQLRRLQ LGKGDAQALM TFFSKMVAEN TGFYFDVELN HEDRPKNVFW ADGRSREVYK 240 EFGEVVMFDT TCLANKYDLP FISFVGVNHH GQSLLLGCGL ISNEDAQTFV WIFSKWLQCM 300 SGCAPQGIVT YQDSEMQNAI EIVFPQTKHR WCLWHVMKKL LDKLGKFAEH QAISVALKDA 360 VFDTQSQDDF EQRWNEGVGK YGLEECNWLS ELYNQRHLWV PCFVKNTFWA GMSTAQQNES 420 MKPFFDGCIQ SKTTSKEFVE QYESALRKKV VKEMKDDAES FSKLVPTVTS YPIEKQVQGV 480 YTISKFKEFQ VEVIGKMYCD FLQIEEGPMV KRYVIREDVW LEDFNKRMTF TFSFDERDCA 540 VHCSCQMFEF QGILCRHAVN VLIHNDVRLL PDKYILRRWR KDVKRSYSKV KVSFNCLEND 600 IESVRRNELS SNFSKIAEWG TANDEQYSHI KQWLAYLENE LKLGGGSCT

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MEGVSVSSAN DATVVAVFAD KAVTKETRVE SGELHGNAES EPKIGLTFDG IEEMFECYKN  60
YGKHMGFSVK KKSNRKNVEG NLRSVTFCCA REGTPKTTAR NPLRPHVSMQ SGCKARLSAR  120
LNMVGGWEIS VLALEHNHEL NPSISRFVQY HRKPKRKDRG GDKISTSSVN EAGGNEKDSG  180
NMIEQLRRLQ LGKGDAQALM TFFSKMVAEN TGFYFDVELN HEDRPKNVFW ADGRSREVYK  240
EFGEVVMFDT TCLANKYDLP FISFVGVNHH GQSLLLGCGL ISNEDAQTFV WIFSKWLQCM  300
SGCAPQGIVT YQDSEMQNAI EIVFPQTKHR WCLWHVMKKL LDKLGKFAEH QAISVALKDA  360
VFDTQSQDDF EQRWNEGVGK YGLEECNWLS ELYNQRHLWV PCFVKNTFWA GMSTAQQNES  420
MKPFFDGCIQ SKTTSKEFVE QYESALRKKV VKEMKDDAES FSKLVPTVTS YPIEKQVQGV  480
YTISKFKEFQ VEVIGKMYCD FLQIEEGPMV KRYVIREDVW LEDFNKRMTF TFSFDERDCA  540
VHCSCQMFEF QGILCRHAVN VLIHNDVRLL PDKYILRRWR KDVKRSYSKV KVSFNCLEND  600
IESVRRNELS SNFSKIAEWG TANDEQYSHI KQWLAYLENE LKLGGGSCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-108	FAR1 family protein