PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026388057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 992aa MW: 112333 Da PI: 4.7442 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.1 | 1e-13 | 8 | 53 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_026388057.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 32.8 | 1.6e-10 | 60 | 103 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_026388057.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 992 aa Download sequence |
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPNDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDNRQR KRKRKGIDYN AEIPFEKKPP AGFYDIVDED RPVEQPQFPT 240 TIEELEGKRR ADVEAQLRKQ DVAKNKIAQR QDAPSSVLQV NKLNDPETVR KRSKLMLPAP 300 QITDHELEEI AKMGFASDLL AGSEAEGSGA TRALLANYSQ TPRHGMTPFR TPQRTPGGKA 360 DAIMMEAENL ARLRESQTPL LGGDNPDLHP SDFSGVTPKR RDIQTPNPMA TPLSTPGASG 420 VTPRIGMTPS NDAYSSGMTP RGTPLRDELH INEDMDMPES LKHDLRRQAE LRRNLQSGLI 480 NLPQPRNEYQ IVIQPLPQDN DEPEDMIEED MSDRIAREKT EEEARQQALL KKRSKVLQRE 540 LPRPPSASLE LIRNSLVRTD EDKSSFVPPT PIEQADEMVR KELLGLLEHD NAKYPLDEKV 600 EKEKKKGGKR ASNGKSAFIP EIEDFEEEEM KEADLLIREE IQFLRVAMRH ENEPVDEYVR 660 VHDACLEDIM YFPARGAYGL SSVANNMEKL GALQNEFENV KKRMDDETKK AQRLEQKIKL 720 LTHGYQMRGG KLWTQAEATF KQMDTAATEL ECFQALQKQE QLAASYRING LEEEIKKQKE 780 LEKNLQHRYG NLIAEQDKIE RLFEEYRSQE KLQEESNARE FDLPSATNET DNAQSNGEQN 840 STATMDVDTS IAAVEEDKEV QLQGSNCEGP TDEMKIDPST DSMAVDLGGS AEISEEETNG 900 LGCDGNQMSE IPKENEPEIP KENEQIIDTI SDQNSKADDI SSNGDGITQH AADDLSKEAP 960 SADENLIQKP TEMVDAVTDL VSETTEGGDG RE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 186 | 205 | KRRELKAAGIDNRQRKRKRK |
2 | 200 | 205 | RKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |