PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387950.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 687aa    MW: 78052.9 Da    PI: 5.4475
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS394.31.3e-1203156852374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA+avs+gd + a++lL++l +++sp+gd  qR+a+yf+ +L+arla+ +s++y++lp ++ s    ++ l+a++lf  ++P+lk+s++
  XP_026387950.1 315 QTLLIHCAQAVSAGDSRTASELLKQLTQHSSPYGDGSQRVAHYFADGLEARLAGYGSQIYSTLPRKPPS---AADLLKAYQLFMVTFPFLKISYF 406
                     689***************************************************************999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++HiiDf+i +G+QWp+L+q L++R++gpp+lRiTg+g pe+g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026387950.1 407 FANQTIGSLAENANTLHIIDFGIIYGFQWPCLMQRLSKRKGGPPKLRITGIGLPEPGfrPAERVEETGRRLRDYAKELNVPFEYHG-IAQKWETI 500
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n++++ ++lldesv l+s+rd+vL+l+++++Pkv+v +  +  +ns+ F+ rf +al ++s+lfd l++ +pre+ er+ 
  XP_026387950.1 501 QLEDLKINTDELLVANCMYHGKNLLDESVILDSPRDAVLELIRKMNPKVFVQAILNGTYNSPFFVSRFRDALFHFSSLFDVLDTIVPRENPERMI 595
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er ++++e+ n++aceg+er+er et+++W++r ++aGF ++pl+++++k+ak      + + + v+e+s +l+lgWk++ L+++S+Wr
  XP_026387950.1 596 IERDFFSKEAFNIIACEGSERIERPETYKQWQSRNMKAGFMQLPLNTDIMKKAKKQAISDYHKDFVVDEDSRWLLLGWKGKILFAISSWR 685
                     *****************************************************87665555466*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
MDQNHHTFSS SSSNSGSTDT SSSSNVSQEE EFDFSDVVLH YINQMLMEEN NDENNLVFQE  60
DYLALQSAEK PFYDILGQMY PTDCNPEVQI DNFTHYNSSK NAVETNWIDE LGVYESLFDI  120
GSVPSDYTFQ ADQTAPQLSH DPSNSFNSVV GGLVESGLGK VQVPDVDSES EPIWQFRKGV  180
EANKFHSDDN NLIINLEHNE LIYVERKKEA SEAADVVVPL DKDVQKISPY RSRGKKNVHR  240
EDIDLEGKSN KQLAAVQTAM FDMVLISDDE KGKKADSILR ESLKIETRKN LHQNGGRRSH  300
GKKQTGKKDV VVDLQTLLIH CAQAVSAGDS RTASELLKQL TQHSSPYGDG SQRVAHYFAD  360
GLEARLAGYG SQIYSTLPRK PPSAADLLKA YQLFMVTFPF LKISYFFANQ TIGSLAENAN  420
TLHIIDFGII YGFQWPCLMQ RLSKRKGGPP KLRITGIGLP EPGFRPAERV EETGRRLRDY  480
AKELNVPFEY HGIAQKWETI QLEDLKINTD ELLVANCMYH GKNLLDESVI LDSPRDAVLE  540
LIRKMNPKVF VQAILNGTYN SPFFVSRFRD ALFHFSSLFD VLDTIVPREN PERMIIERDF  600
FSKEAFNIIA CEGSERIERP ETYKQWQSRN MKAGFMQLPL NTDIMKKAKK QAISDYHKDF  660
VVDEDSRWLL LGWKGKILFA ISSWRPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-179GRAS family protein