PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026387949.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 678aa    MW: 76502.2 Da    PI: 5.797
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026387949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.42.1e-1163066762374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA+av++gd + a++lL++ ++++sp+gd  qRla+yf+ +L+arla+s+s+++++lp +++s    ++ l+a++lf  + P+lk+s++
  XP_026387949.1 306 QTLLIHCAQAVAAGDSRTATELLKQTRQHSSPNGDGSQRLAHYFADGLEARLAGSGSQICSTLPRKTAS---AVDFLKAYQLFMVALPFLKISNF 397
                     689************************************************************999999...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aNq+I   +e+++++HiiDf+i +G+QWp+L+q L++R++++p+lRiTg+g pe+g   +e++eetg+rL+++A+el+vpfe++  +a+++e++
  XP_026387949.1 398 FANQTIGYLAENATTIHIIDFGILYGFQWPCLIQRLSKRKGSSPKLRITGIGLPEPGfrPAERVEETGRRLRDYAKELNVPFEYHG-IAQKWETI 491
                     ********************************************************9*****************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L+++++E l+ n+++q ++lldesv l+s+rd+vLkl+++++P+v+v+   +  +ns+ F+ rf +al ++ ++fd l++ +pr++ eri+
  XP_026387949.1 492 QLEDLKINTDELLVANCMYQGKNLLDESVILNSPRDAVLKLIRKMNPDVFVHGILNGTYNSPFFVPRFRDALFHFYSMFDVLDTIVPRDNPERIF 586
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er +l++e+ n++aceg+er+er et +kW+ r ++aG+ ++pl++++ k+ak      + + + v+e+  +l+lgWk+r+L++vS+W+
  XP_026387949.1 587 IERNFLAKEVLNIIACEGSERVERPETCKKWHLRNTKAGLMQLPLNTHIIKKAKKQAISDYHKDFVVDEDGRWLLLGWKGRTLFAVSSWK 676
                     **************************************************99987655555466*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    
MDQNHCTFSS SSSSSNSGST DTSSSSNVSQ EEEFEFSDVV LNYINQMLME ENNDENNLVF  60
QEDYLALQSA EKPFYDILGE KYPTDSNPGV QIDENFTHYN GNKNAVETSW IDELGMYATL  120
LNAESVPSDY TFQAEAQTPQ LSCNPSDSLN SIVEGQVESG EDKVQVTDVR SETEPVWQFR  180
KGVQEANKFL PDNNSVERNG FNCGKFLPDV VVPLDKDVQQ ISSRGKKNVH REDIDLEGKS  240
NKQLAAVQTA MFDMVLISDD EKGKKADSIL RESLNIETRK NLHQNGGRRS HGKKQAGKKD  300
LLVDLQTLLI HCAQAVAAGD SRTATELLKQ TRQHSSPNGD GSQRLAHYFA DGLEARLAGS  360
GSQICSTLPR KTASAVDFLK AYQLFMVALP FLKISNFFAN QTIGYLAENA TTIHIIDFGI  420
LYGFQWPCLI QRLSKRKGSS PKLRITGIGL PEPGFRPAER VEETGRRLRD YAKELNVPFE  480
YHGIAQKWET IQLEDLKINT DELLVANCMY QGKNLLDESV ILNSPRDAVL KLIRKMNPDV  540
FVHGILNGTY NSPFFVPRFR DALFHFYSMF DVLDTIVPRD NPERIFIERN FLAKEVLNII  600
ACEGSERVER PETCKKWHLR NTKAGLMQLP LNTHIIKKAK KQAISDYHKD FVVDEDGRWL  660
LLGWKGRTLF AVSSWKPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein