PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026386716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 305aa MW: 33807.9 Da PI: 9.4207 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4.2e-08 | 6 | 53 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrw 44 +g W+ eE++ + +a+++ + W++I+++++ ++ +++k ++ XP_026386716.1 6 KGEWSREEEKAFENAIAKTHNTmdeqqYWEKISSMVQ-SKSMEELKQHY 53 799**********************************.**********9 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.6e-12 | 145 | 189 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + + G+g+W++I+r + Rt+ q+ s+ qky XP_026386716.1 145 PWTEEEHRLFLLGLDKCGKGDWRSISRNFVISRTPTQVASHAQKY 189 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MESAVKGEWS REEEKAFENA IAKTHNTMDE QQYWEKISSM VQSKSMEELK QHYGVLVQDI 60 NAIEAGLVSL PRYLGEEEET NMDKQTSSAS DRKKIGSTSG FNTSRSSYFP VGMIGNNDLE 120 GKQQALVRSG SGSKSNQLEK RKGIPWTEEE HRLFLLGLDK CGKGDWRSIS RNFVISRTPT 180 QVASHAQKYF IRLNSMNRDR RRTSIHDITN LNNGVAATPQ GPITGEQTNT TTSSTPNSYI 240 GPSFKHHRSS HSPAMPALAM PRMASAPGQI ISAIGTPVTI PPPGHHYPPP YTHMAYPVVP 300 AAMHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 2e-72 | MYB family protein |