PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026386660.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 311aa    MW: 34370.6 Da    PI: 6.6639
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026386660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260100.41.7e-314107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l+++ pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+
  XP_026386660.1   4 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINSGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQA 98 
                     6********************************************************************************************** PP

          DUF260  91 kaelallke 99 
                     ++e++l ++
  XP_026386660.1  99 AVEAVLKGA 107
                     ***998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MRMSCNGCRV LRKGCSENCS IRPCLQWIKS PESQANATVF LAKFYGRAGL MNLINSGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGAPIM QIPSEAAVSP  120
SLPFKGAYDI RHVSKDDNSA ASQELTKVKT RNRFKRSSTA PVKLKPVKIA HSPTESSVHH  180
EPIVDSDDDH NESTQLCNLD WNRSFIDELN RDTSHDSSNS HQGGYSRESE SMFSVETVEA  240
SMVSSRAEQE HVVPQSQCHS DDSEVELELS LGFESSRLQR SSPAKKQRIE MDGSDIGGRT  300
CKIELGLDFP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.19e-91LBD family protein