PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386498.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 421aa MW: 50129.8 Da PI: 6.2288

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.2	1.8e-28	46	179	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 p GfrF+Ptd +l++++L kk++g++le + i+ev++ ++ dL +k+k+ +ew+fF++r++ky++g r++r + +g Wka gk k+ XP_026386498.1 46 PIGFRFKPTDAQLISDFLSKKIRGQQLES-NDIQEVNLRDFTYADLTEKYKEyavYGSEWHFFTTRERKYPKGGRPRRDAGnhEGHWKAYGKVKP 139 79**********************999.66**********854443333667****************543349******* PP NAM 92 vlskkgelvglkktLvfy....kgrapkgektdWvmheyr 127 + +++++++g+k+tL+++ + ++++++++d m ey XP_026386498.1 140 IQDEHKRVIGTKRTLAYHifnkDSSTKESTNADIKMVEYV 179 ****************8765456666677788888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MKKKMGDQNI VSNSDSSPSE KNSPAADQFT CSTTQCRIYM DGSLRPIGFR FKPTDAQLIS 60 DFLSKKIRGQ QLESNDIQEV NLRDFTYADL TEKYKEYAVY GSEWHFFTTR ERKYPKGGRP 120 RRDAGNHEGH WKAYGKVKPI QDEHKRVIGT KRTLAYHIFN KDSSTKESTN ADIKMVEYVV 180 VDAEIAAVPD TNMECSTDTV KPFTDFCLCK IYKKPSKLPG NSDSPTDGDA REMEFVDPFP 240 WFANNLSVEE ENECWEMELK EENQTNAYFN ELPDMDQNDP DFWDFDGQHL LTDEQLSLIR 300 CDRINSPVAA QHQQQPQQQW HPQQQRQQQW RQQQPTQQQW HQQQQQTQQQ WLQQQQQTQQ 360 HSHPQQQTQQ QWHHQQQQTQ QQWHQQQQQT QQHWHPQQQT QQQWHQQQQT QQQWHQQQQT 420 Q

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MKKKMGDQNI VSNSDSSPSE KNSPAADQFT CSTTQCRIYM DGSLRPIGFR FKPTDAQLIS  60
DFLSKKIRGQ QLESNDIQEV NLRDFTYADL TEKYKEYAVY GSEWHFFTTR ERKYPKGGRP  120
RRDAGNHEGH WKAYGKVKPI QDEHKRVIGT KRTLAYHIFN KDSSTKESTN ADIKMVEYVV  180
VDAEIAAVPD TNMECSTDTV KPFTDFCLCK IYKKPSKLPG NSDSPTDGDA REMEFVDPFP  240
WFANNLSVEE ENECWEMELK EENQTNAYFN ELPDMDQNDP DFWDFDGQHL LTDEQLSLIR  300
CDRINSPVAA QHQQQPQQQW HPQQQRQQQW RQQQPTQQQW HQQQQQTQQQ WLQQQQQTQQ  360
HSHPQQQTQQ QWHHQQQQTQ QQWHQQQQQT QQHWHPQQQT QQQWHQQQQT QQQWHQQQQT  420
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-22	NAC family protein