PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386413.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 760aa MW: 87360.4 Da PI: 7.6189

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.5	1.1e-18	65	152	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y++YAk++GF v+k++s+k ++g t+ C ++g++++++ + k r+ ++ +t+Cka l + dg+w+v++++l HnHel+p XP_026386413.1 65 EYYKNYAKQLGFPVKKRSSTKD-DDGVLRYVTLACARSGTSRSNSAS--KGLRPPQSIKTNCKALLSACISLDGRWRVSSVRLVHNHELSP 152 69*************99997.9999***********99988..9999***********9999***************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MEETSSGNPS LEIVVSQEND GNEAIIDEND STKKNKEAEI DNVGNKELEE PKVGMLFGTA 60 DEVLEYYKNY AKQLGFPVKK RSSTKDDDGV LRYVTLACAR SGTSRSNSAS KGLRPPQSIK 120 TNCKALLSAC ISLDGRWRVS SVRLVHNHEL SPDKVCFFRC KRVLNSHGKR KLDLNDKVGV 180 KKDKNSSSLV EVGGSENTSI LLGKDGRNYS EKASQLQLEE GDATLILDYL MKMKSQDANF 240 FYAIDLDKQG RLRNVFWADA RSRSSYEEFG DVIKFDTTYL ANRYVIPFTP FVGVNHHGQP 300 ILFGCALVSS EDTETFIWLF QTWLACMSGR APSGIITILD RAMETAIENV FPNIQHRWCL 360 LHIMKILPVK LKEYSDSESI MLALKCVVYD SVSQSEFEEQ WNIMIENYKL HNDDFLTGLY 420 NERCRWVPVF VKENFWGGIS PIYRNESMRS FFDDHVKSKT SFKQFVKRYE DALRSNVEKE 480 IHEDFKCFSS SVNCVTHYDM EKQAQAVYTI SKFKEFQNEL TGKMYCDLAT FEVDGTSLEY 540 RISEDIMIGE KKKSVTFKVR FQEHDNEIVC SCSKFEFTGI LCRHAIYVFI RHKVHLFPNK 600 YIMQRWRKDV KRCHTKVKLK YSDWDTTPEA QRCDKMEKSF NEIKEMANDS EDKCVIVMSW 660 MNKLKEELIN HDYKSIRVTP KLPIPRILGN NVKSIPKEGQ SMLSPNYLYG SNGTGNVALP 720 IPIIYDNRFQ GHHHQAWNGV YSMFSLPSSN LQGLGNQKPD

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MEETSSGNPS LEIVVSQEND GNEAIIDEND STKKNKEAEI DNVGNKELEE PKVGMLFGTA  60
DEVLEYYKNY AKQLGFPVKK RSSTKDDDGV LRYVTLACAR SGTSRSNSAS KGLRPPQSIK  120
TNCKALLSAC ISLDGRWRVS SVRLVHNHEL SPDKVCFFRC KRVLNSHGKR KLDLNDKVGV  180
KKDKNSSSLV EVGGSENTSI LLGKDGRNYS EKASQLQLEE GDATLILDYL MKMKSQDANF  240
FYAIDLDKQG RLRNVFWADA RSRSSYEEFG DVIKFDTTYL ANRYVIPFTP FVGVNHHGQP  300
ILFGCALVSS EDTETFIWLF QTWLACMSGR APSGIITILD RAMETAIENV FPNIQHRWCL  360
LHIMKILPVK LKEYSDSESI MLALKCVVYD SVSQSEFEEQ WNIMIENYKL HNDDFLTGLY  420
NERCRWVPVF VKENFWGGIS PIYRNESMRS FFDDHVKSKT SFKQFVKRYE DALRSNVEKE  480
IHEDFKCFSS SVNCVTHYDM EKQAQAVYTI SKFKEFQNEL TGKMYCDLAT FEVDGTSLEY  540
RISEDIMIGE KKKSVTFKVR FQEHDNEIVC SCSKFEFTGI LCRHAIYVFI RHKVHLFPNK  600
YIMQRWRKDV KRCHTKVKLK YSDWDTTPEA QRCDKMEKSF NEIKEMANDS EDKCVIVMSW  660
MNKLKEELIN HDYKSIRVTP KLPIPRILGN NVKSIPKEGQ SMLSPNYLYG SNGTGNVALP  720
IPIIYDNRFQ GHHHQAWNGV YSMFSLPSSN LQGLGNQKPD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein