PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026386270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 462aa MW: 52048.5 Da PI: 7.1599 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 172 | 217 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_026386270.1 172 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 217 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 224 | 267 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_026386270.1 224 RRAFSEEEEEKLMSAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 267 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence |
MTLQKQFNTA AIIYHHQVYQ DMNNNSNNKY NTPAAATTTE NCNSTSFAPS MGLFAEISSL 60 SINPNGFSSK DSKYICPMNN LEMVSKKTSC MGIPFLTNSN NSLVDQLHLN HNEKCASGGK 120 GSDFSDGFEG NNGMNMDQDN SNSNLINEEN PYDSISVNGK EIDGGQSKLC ARGHWRPAED 180 SKLKELVALY GPQNWNLIAE KLEGRSGKSC RLRWFNQLDP KINRRAFSEE EEEKLMSAHR 240 VYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKFREQSNVY RRRKLSQTVH RKLDDNSSLT 300 TEQSCFDLNN GSFTSLSPCP FSTSINTEYM FLGSSNNNNK ISPDHQSGFC GADQTTFDPF 360 TGSRNQDLTR FLRQSWERPR DESSFYHHPH HHHQQQQTLT QMMTMQQSNH SHPSIFSNSM 420 TSTSQVSDIE ASASIAENRG GVTHFETTIS PPFIDFLGVG AT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 1e-74 | MYB family protein |