PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386198.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 414aa MW: 46364.9 Da PI: 7.1204

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd llv +++++G+g+W++++ g+ R+ k+c++rw +yl XP_026386198.1 14 KGPWTPEEDILLVTYIQEHGPGNWRSVPTSTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	45.5	1.8e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_026386198.1 67 RGEFTDHEESMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGRPPCCDKI GMKKGPWTPE EDILLVTYIQ EHGPGNWRSV PTSTGLLRCS KSCRLRWTNY 60 LRPGIKRGEF TDHEESMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKTQ 120 TGCSDEHDLN RDGPSSPSTS SNSDQTRKTV GSKGQWERRL QSNVDMARQA LYEALSIDHT 180 HHKPTPNNLS VPSSTSTASI HDNSSFNSLM NMKQQQILAP LATTSATPYV SNTENISRWL 240 QGWKNNNNNS TSSTTSSTKD NKHVRSSSES TQNSFINYSS NTTATSEGTP HNHHQGFVHH 300 QHNSSDDILS PEAALESFLS FDNSSSSTVT ATPPPDVPKC ELHEKNFFIY ETSKQGSQSS 360 SDNTTAQVPF SMLEKWLFDE GINTLQEDHQ HQHNHNHQAG FLTLADTADL FLSS

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGRPPCCDKI GMKKGPWTPE EDILLVTYIQ EHGPGNWRSV PTSTGLLRCS KSCRLRWTNY  60
LRPGIKRGEF TDHEESMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKTQ  120
TGCSDEHDLN RDGPSSPSTS SNSDQTRKTV GSKGQWERRL QSNVDMARQA LYEALSIDHT  180
HHKPTPNNLS VPSSTSTASI HDNSSFNSLM NMKQQQILAP LATTSATPYV SNTENISRWL  240
QGWKNNNNNS TSSTTSSTKD NKHVRSSSES TQNSFINYSS NTTATSEGTP HNHHQGFVHH  300
QHNSSDDILS PEAALESFLS FDNSSSSTVT ATPPPDVPKC ELHEKNFFIY ETSKQGSQSS  360
SDNTTAQVPF SMLEKWLFDE GINTLQEDHQ HQHNHNHQAG FLTLADTADL FLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-96	MYB family protein