PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385976.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 935aa MW: 104927 Da PI: 6.4205

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143.3	7e-45	15	129	3	115
CG-1 3 ke.kkrwlkneeiaaiLenfe.kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 +e + rwlk+ ei iL n++ + +t+ +++p+sgsl+L+n+ +++ frkDG++wkkk+ g+tv E he+LKvggvevl+cyYa++ enp+++ XP_026385976.1 15 QEaRVRWLKPVEIQFILLNHDgIYPFTEVVPQNPQSGSLFLINKNVTKSFRKDGHNWKKKRSGRTVAEGHERLKVGGVEVLSCYYAQGAENPNLR 109 56599***********99846889999************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyl 115 rr+yw+L+ ++++ivlvh++ XP_026385976.1 110 RRIYWMLDAAYDHIVLVHHR 129 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV 60 TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY 120 DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS 180 PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF 240 DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSGNNTQ 300 NRNIDIPIFG DTSNFHPIAS TQESSLLYAV ETQLAPVEVI SRLTVAQCQK FSIQEISPEW 360 GYASECSKVI ITGLFHCNSS AHSWKCMFGD VEVPVEIVQE GVFRRQTPPQ SPGQVTFIQE 420 GVLRCYTPPK SPGKVTLCIT TGNREACSQI REFEYCTTPT ASIRNNNLPK TDGMKSAEEL 480 QLLIRFVQML LCDSSTKKKD GITSGTNALE KLIADEYLWE NLKHAVLVGS ESESRIMDSL 540 LQELLKEKLP QWLHSRFKEG ESPGSTSLKK EQEIIHLVAG LGFEWALNLI LSSGIGINFR 600 DTKGWTALHH AANFGREEMV VALIVAGASA GAVTDPTPED PVGKTPGSIA ISRGHKGVAG 660 YLSELALTSH LRSLTLEEND LTKGRSDVEA EIEVESLSID CTDDHHSLRQ SLTAVRNAAL 720 AAARIQNAFR AHSFRKRKQK EDLVSVCDEF GITAADIPAL SATSKMGFPK LRDRVLQNAA 780 VVIQKKYRGW SGQRTFLELK RKIILIQAHV RGHQVRRKLF RWAVGILEKV LLRWRRKRVG 840 LRGLRQETES ADASDDEDIL KVFRKKKVDV TVERAVSWVV SMAHSRGARG QYCRLLESYR 900 QQVKVESCTE TSSASRDDSD SMETNNNDDF FRFPL

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

MNDPDREYDI DTLIQEARVR WLKPVEIQFI LLNHDGIYPF TEVVPQNPQS GSLFLINKNV  60
TKSFRKDGHN WKKKRSGRTV AEGHERLKVG GVEVLSCYYA QGAENPNLRR RIYWMLDAAY  120
DHIVLVHHRV YTDINEGRRN TEASSTLNLT STSNPGFQTA SIQAAASAVS ESYGTYQNPS  180
PFGSGSMDVI PDLIDDNNLF GVWDSPEDIC SLMDAESIRA EQRMLDDLNG KSTDTDILLF  240
DQDELLAVQP AAEYRENVGH SCEIEKPQSS LERDKYSTDP HKHNEEYSYQ WQDPSGNNTQ  300
NRNIDIPIFG DTSNFHPIAS TQESSLLYAV ETQLAPVEVI SRLTVAQCQK FSIQEISPEW  360
GYASECSKVI ITGLFHCNSS AHSWKCMFGD VEVPVEIVQE GVFRRQTPPQ SPGQVTFIQE  420
GVLRCYTPPK SPGKVTLCIT TGNREACSQI REFEYCTTPT ASIRNNNLPK TDGMKSAEEL  480
QLLIRFVQML LCDSSTKKKD GITSGTNALE KLIADEYLWE NLKHAVLVGS ESESRIMDSL  540
LQELLKEKLP QWLHSRFKEG ESPGSTSLKK EQEIIHLVAG LGFEWALNLI LSSGIGINFR  600
DTKGWTALHH AANFGREEMV VALIVAGASA GAVTDPTPED PVGKTPGSIA ISRGHKGVAG  660
YLSELALTSH LRSLTLEEND LTKGRSDVEA EIEVESLSID CTDDHHSLRQ SLTAVRNAAL  720
AAARIQNAFR AHSFRKRKQK EDLVSVCDEF GITAADIPAL SATSKMGFPK LRDRVLQNAA  780
VVIQKKYRGW SGQRTFLELK RKIILIQAHV RGHQVRRKLF RWAVGILEKV LLRWRRKRVG  840
LRGLRQETES ADASDDEDIL KVFRKKKVDV TVERAVSWVV SMAHSRGARG QYCRLLESYR  900
QQVKVESCTE TSSASRDDSD SMETNNNDDF FRFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	816	838	RRKLFRWAVGILEKVLLRWRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-153	CAMTA family protein