PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385341.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 502aa MW: 55140.8 Da PI: 5.5868

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.3	2.7e-11	5	43	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d +l+++v +G+ W+ + + m+ gR +kqc++rw++yl XP_026385341.1 5 DRKLIELVSVYGPIKWSVVEKSMP-GRMGKQCRERWFNYL 43 679*******99******.***********97 PP
2	Myb_DNA-binding	34.7	4.1e-11	49	90	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++WT+ E + +v+a + +G+ W Ia+ ++ gRt++ +ks w XP_026385341.1 49 KDAWTEYEKLAIVKAQQIYGNQ-WVEIAKLLP-GRTENAIKSLW 90 679***************99.*****.******988 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MDPGDRKLIE LVSVYGPIKW SVVEKSMPGR MGKQCRERWF NYLDPTIKKD AWTEYEKLAI 60 VKAQQIYGNQ WVEIAKLLPG RTENAIKSLW KCSLKNKLDF YLSAEQLPPD LKTGEDKGLN 120 ASAESCLGNE NSIRNLCNAP LQKNLDIHLS TERLPSFGSV LTTGEDNAIL DSDLSTEQSP 180 SVGSVLNMRG DYAKKTKSSV VGNSAVCNDK GFSAASRSCL GNGDTVKNPW NNSLMENFGF 240 HLSTGQLLPA DTILKTEDYA LQISISPVAG KMNGRNNEGF YAGTQCSLGD EDFYNVDENH 300 MDLVEPSTPE FLDTEDPTGV LATDSSNSLG RGCRQLASEH GFGRLNSKSN LVKYRSIADI 360 ERSIAGTPSP ISVPVTGSFN QETSDLTSDS SPTICVPPAC INSLVSQRVK SVLKDAAQNF 420 SNLPSILSKR KRQATGTPNK NEHIKQVQDE ESSLSLELEK ADNSKEKPAS MVVNLENENT 480 SCHENSTIRL FYTRKAYGLR QN

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MDPGDRKLIE LVSVYGPIKW SVVEKSMPGR MGKQCRERWF NYLDPTIKKD AWTEYEKLAI  60
VKAQQIYGNQ WVEIAKLLPG RTENAIKSLW KCSLKNKLDF YLSAEQLPPD LKTGEDKGLN  120
ASAESCLGNE NSIRNLCNAP LQKNLDIHLS TERLPSFGSV LTTGEDNAIL DSDLSTEQSP  180
SVGSVLNMRG DYAKKTKSSV VGNSAVCNDK GFSAASRSCL GNGDTVKNPW NNSLMENFGF  240
HLSTGQLLPA DTILKTEDYA LQISISPVAG KMNGRNNEGF YAGTQCSLGD EDFYNVDENH  300
MDLVEPSTPE FLDTEDPTGV LATDSSNSLG RGCRQLASEH GFGRLNSKSN LVKYRSIADI  360
ERSIAGTPSP ISVPVTGSFN QETSDLTSDS SPTICVPPAC INSLVSQRVK SVLKDAAQNF  420
SNLPSILSKR KRQATGTPNK NEHIKQVQDE ESSLSLELEK ADNSKEKPAS MVVNLENENT  480
SCHENSTIRL FYTRKAYGLR QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-41	MYB family protein