PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385340.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 591aa MW: 65482.4 Da PI: 5.6679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.8e-08	36	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l + v+ + g +Wk I ++ +t+ qc +rw k+l XP_026385340.1 36 KGGWTAEEDDYLRKSVEAYKGQNWKII--GLP-DKTAVQCLNRWKKVL 80 688*********************5..689.**********976 PP
2	Myb_DNA-binding	55.2	1.6e-17	86	132	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v +G+ W+ + + m+ gR +kqc++rw++yl XP_026385340.1 86 KGTWTPEEDRKLIELVSVYGPIKWSVVEKSMP-GRMGKQCRERWFNYL 132 799***************99******.***********97 PP
3	Myb_DNA-binding	34.4	5e-11	138	179	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++WT+ E + +v+a + +G+ W Ia+ ++ gRt++ +ks w XP_026385340.1 138 KDAWTEYEKLAIVKAQQIYGNQ-WVEIAKLLP-GRTENAIKSLW 179 679***************99.*****.******988 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MAEAEIETPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRKS VEAYKGQNWK 60 IIGLPDKTAV QCLNRWKKVL NPNVNKGTWT PEEDRKLIEL VSVYGPIKWS VVEKSMPGRM 120 GKQCRERWFN YLDPTIKKDA WTEYEKLAIV KAQQIYGNQW VEIAKLLPGR TENAIKSLWK 180 CSLKNKLDFY LSAEQLPPDL KTGEDKGLNA SAESCLGNEN SIRNLCNAPL QKNLDIHLST 240 ERLPSFGSVL TTGEDNAILD SDLSTEQSPS VGSVLNMRGD YAKKTKSSVV GNSAVCNDKG 300 FSAASRSCLG NGDTVKNPWN NSLMENFGFH LSTGQLLPAD TILKTEDYAL QISISPVAGK 360 MNGRNNEGFY AGTQCSLGDE DFYNVDENHM DLVEPSTPEF LDTEDPTGVL ATDSSNSLGR 420 GCRQLASEHG FGRLNSKSNL VKYRSIADIE RSIAGTPSPI SVPVTGSFNQ ETSDLTSDSS 480 PTICVPPACI NSLVSQRVKS VLKDAAQNFS NLPSILSKRK RQATGTPNKN EHIKQVQDEE 540 SSLSLELEKA DNSKEKPASM VVNLENENTS CHENSTIRLF YTRKAYGLRQ N

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MAEAEIETPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRKS VEAYKGQNWK  60
IIGLPDKTAV QCLNRWKKVL NPNVNKGTWT PEEDRKLIEL VSVYGPIKWS VVEKSMPGRM  120
GKQCRERWFN YLDPTIKKDA WTEYEKLAIV KAQQIYGNQW VEIAKLLPGR TENAIKSLWK  180
CSLKNKLDFY LSAEQLPPDL KTGEDKGLNA SAESCLGNEN SIRNLCNAPL QKNLDIHLST  240
ERLPSFGSVL TTGEDNAILD SDLSTEQSPS VGSVLNMRGD YAKKTKSSVV GNSAVCNDKG  300
FSAASRSCLG NGDTVKNPWN NSLMENFGFH LSTGQLLPAD TILKTEDYAL QISISPVAGK  360
MNGRNNEGFY AGTQCSLGDE DFYNVDENHM DLVEPSTPEF LDTEDPTGVL ATDSSNSLGR  420
GCRQLASEHG FGRLNSKSNL VKYRSIADIE RSIAGTPSPI SVPVTGSFNQ ETSDLTSDSS  480
PTICVPPACI NSLVSQRVKS VLKDAAQNFS NLPSILSKRK RQATGTPNKN EHIKQVQDEE  540
SSLSLELEKA DNSKEKPASM VVNLENENTS CHENSTIRLF YTRKAYGLRQ N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-72	MYB family protein