PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385339.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 593aa MW: 65640.5 Da PI: 5.6679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.7	2.3e-12	36	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l + v+ + g +Wk Ia+ ++ +t+ qc +rw k+l XP_026385339.1 36 KGGWTAEEDDYLRKSVEAYKGQNWKIIASGLP-DKTAVQCLNRWKKVL 82 688***************************.**********976 PP
2	Myb_DNA-binding	55.2	1.6e-17	88	134	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v +G+ W+ + + m+ gR +kqc++rw++yl XP_026385339.1 88 KGTWTPEEDRKLIELVSVYGPIKWSVVEKSMP-GRMGKQCRERWFNYL 134 799***************99******.***********97 PP
3	Myb_DNA-binding	34.4	5e-11	140	181	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++WT+ E + +v+a + +G+ W Ia+ ++ gRt++ +ks w XP_026385339.1 140 KDAWTEYEKLAIVKAQQIYGNQ-WVEIAKLLP-GRTENAIKSLW 181 679***************99.*****.******988 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MAEAEIETPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRKS VEAYKGQNWK 60 IIASGLPDKT AVQCLNRWKK VLNPNVNKGT WTPEEDRKLI ELVSVYGPIK WSVVEKSMPG 120 RMGKQCRERW FNYLDPTIKK DAWTEYEKLA IVKAQQIYGN QWVEIAKLLP GRTENAIKSL 180 WKCSLKNKLD FYLSAEQLPP DLKTGEDKGL NASAESCLGN ENSIRNLCNA PLQKNLDIHL 240 STERLPSFGS VLTTGEDNAI LDSDLSTEQS PSVGSVLNMR GDYAKKTKSS VVGNSAVCND 300 KGFSAASRSC LGNGDTVKNP WNNSLMENFG FHLSTGQLLP ADTILKTEDY ALQISISPVA 360 GKMNGRNNEG FYAGTQCSLG DEDFYNVDEN HMDLVEPSTP EFLDTEDPTG VLATDSSNSL 420 GRGCRQLASE HGFGRLNSKS NLVKYRSIAD IERSIAGTPS PISVPVTGSF NQETSDLTSD 480 SSPTICVPPA CINSLVSQRV KSVLKDAAQN FSNLPSILSK RKRQATGTPN KNEHIKQVQD 540 EESSLSLELE KADNSKEKPA SMVVNLENEN TSCHENSTIR LFYTRKAYGL RQN

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MAEAEIETPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRKS VEAYKGQNWK  60
IIASGLPDKT AVQCLNRWKK VLNPNVNKGT WTPEEDRKLI ELVSVYGPIK WSVVEKSMPG  120
RMGKQCRERW FNYLDPTIKK DAWTEYEKLA IVKAQQIYGN QWVEIAKLLP GRTENAIKSL  180
WKCSLKNKLD FYLSAEQLPP DLKTGEDKGL NASAESCLGN ENSIRNLCNA PLQKNLDIHL  240
STERLPSFGS VLTTGEDNAI LDSDLSTEQS PSVGSVLNMR GDYAKKTKSS VVGNSAVCND  300
KGFSAASRSC LGNGDTVKNP WNNSLMENFG FHLSTGQLLP ADTILKTEDY ALQISISPVA  360
GKMNGRNNEG FYAGTQCSLG DEDFYNVDEN HMDLVEPSTP EFLDTEDPTG VLATDSSNSL  420
GRGCRQLASE HGFGRLNSKS NLVKYRSIAD IERSIAGTPS PISVPVTGSF NQETSDLTSD  480
SSPTICVPPA CINSLVSQRV KSVLKDAAQN FSNLPSILSK RKRQATGTPN KNEHIKQVQD  540
EESSLSLELE KADNSKEKPA SMVVNLENEN TSCHENSTIR LFYTRKAYGL RQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-74	MYB family protein