PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385003.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 417aa MW: 47997.9 Da PI: 7.9837

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.7	1.6e-17	44	130	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++++k +GF v+ks+s k+ g i +++f+C + gk ++ +++ r++a+ ++gC+akl+++++ +++++l+l+HnHel p XP_026385003.1 44 EFYKTFGKVTGFPVVKSTSVKN-GAGYIRSYKFTCARAGKCSSVSEN---PLRPQATIKCGCQAKLVLQLDCLVGYVISQLNLDHNHELKP 130 6****************999.7788**********999888...999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MVLISLLLQE ETSKKSDCVD INGSKPHIQP ALGMGFESID DAWEFYKTFG KVTGFPVVKS 60 TSVKNGAGYI RSYKFTCARA GKCSSVSENP LRPQATIKCG CQAKLVLQLD CLVGYVISQL 120 NLDHNHELKP ENARHFRCNR FINSRVKNQI DLLDQSGVRL CKSYDVCVNE AGGHENMTCS 180 QKDCRNLIDK LRNSRLGEGD AVAILTYFAK MSSQGLGFYS SVDVDDTGRL RTVFWADGRS 240 REEYKEFGEV ISFDTTYLVN RYDMPFAPFV GVNHHGESIL FGCGLVVYED TDSFAWLFTK 300 WLDCMSGCAP PAIVTDQAKA MQNAIEIVFP NSRHRWCIWH VMKKLPEKFK SHRNYLRITY 360 TMKKVVYNSQ YQSEFETKWM EMLQKYKLYD NEWLKTLYEE RHRWVPCYLN DCFWAGM

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MVLISLLLQE ETSKKSDCVD INGSKPHIQP ALGMGFESID DAWEFYKTFG KVTGFPVVKS  60
TSVKNGAGYI RSYKFTCARA GKCSSVSENP LRPQATIKCG CQAKLVLQLD CLVGYVISQL  120
NLDHNHELKP ENARHFRCNR FINSRVKNQI DLLDQSGVRL CKSYDVCVNE AGGHENMTCS  180
QKDCRNLIDK LRNSRLGEGD AVAILTYFAK MSSQGLGFYS SVDVDDTGRL RTVFWADGRS  240
REEYKEFGEV ISFDTTYLVN RYDMPFAPFV GVNHHGESIL FGCGLVVYED TDSFAWLFTK  300
WLDCMSGCAP PAIVTDQAKA MQNAIEIVFP NSRHRWCIWH VMKKLPEKFK SHRNYLRITY  360
TMKKVVYNSQ YQSEFETKWM EMLQKYKLYD NEWLKTLYEE RHRWVPCYLN DCFWAGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-84	FAR1 family protein