PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382668.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 389aa MW: 44747.6 Da PI: 8.9578

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61	2e-19	10	89	10	90
HHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 10 vlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 + ++ l lpkkf++++ + ++ + t++l+ +sg++W+v+l ++k+++ +l+kGW+ Fvk+++Lke+D + Fk+ + ++ XP_026382668.1 10 N-YHHHLKLPKKFVKNClmsEFPEIDGSTVSLKGPSGQTWTVEL--KRKDESkLYLKKGWEIFVKEHNLKENDALFFKYRS--GG 89 3.34559******9889955555677**************..5555555***********************854..44 PP
2	B3	38.1	2.8e-12	284	363	1	84
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+ ps+v+ + +v+p k a+++ g++ ++l+ +g++W+ +++y ++ ++ + GWk+Fv n+L++g ++F+ XP_026382668.1 284 FVVLIQPSHVSGICFMVIPIKSARKYlpyGSD-----NISLKM-NGKTWQAQYTYYGRIAGF-RGPGWKKFVLKNKLEVGNACLFEK 363 5566779999999***********765433.....566555.89***887776665.577*****************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MNFFTFLPKN YHHHLKLPKK FVKNCLMSEF PEIDGSTVSL KGPSGQTWTV ELKRKDESKL 60 YLKKGWEIFV KEHNLKENDA LFFKYRSGGI FDVLMFDDGD FCEKESSYFV RNCQGCHRST 120 NGGLNEGRRV ESEPRRYNEG ENEPRRYKEG ENEPRRSEEE ESEPSIEIIE PKRLRYTDKP 180 ITISDEEQEE DADRETPRLL GREREPVCYG RRLPKSVPGC QSKAIVRTTE VSFTGENSED 240 EETEVNQVSP LAIALQRRTV HAKEIHLPYK QAVREGKRRG TPHFVVLIQP SHVSGICFMV 300 IPIKSARKYL PYGSDNISLK MNGKTWQAQY TYYGRIAGFR GPGWKKFVLK NKLEVGNACL 360 FEKTTSSATS SRATSNSITF SVSIFRNGV

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MNFFTFLPKN YHHHLKLPKK FVKNCLMSEF PEIDGSTVSL KGPSGQTWTV ELKRKDESKL  60
YLKKGWEIFV KEHNLKENDA LFFKYRSGGI FDVLMFDDGD FCEKESSYFV RNCQGCHRST  120
NGGLNEGRRV ESEPRRYNEG ENEPRRYKEG ENEPRRSEEE ESEPSIEIIE PKRLRYTDKP  180
ITISDEEQEE DADRETPRLL GREREPVCYG RRLPKSVPGC QSKAIVRTTE VSFTGENSED  240
EETEVNQVSP LAIALQRRTV HAKEIHLPYK QAVREGKRRG TPHFVVLIQP SHVSGICFMV  300
IPIKSARKYL PYGSDNISLK MNGKTWQAQY TYYGRIAGFR GPGWKKFVLK NKLEVGNACL  360
FEKTTSSATS SRATSNSITF SVSIFRNGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-22	B3 family protein