PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382319.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 396aa MW: 44907.5 Da PI: 6.7599

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.2e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk +++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_026382319.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLSTTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********87788999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg+ktdW+mhe+rl XP_026382319.1 108 eGTKCIGLKKSLVFYTGRAAKGVKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP 60 KLSTTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYTGRAAKGV KTDWMMHEFR LPSLTNPATP KRFTDKTLPV NDSWAICRIF KKTNSMAQRA 180 LSHSWVSPIP ELNGSQIPNK NINYTHFSKE SVSCISEAGS TIQFSCNNNL QQCSPTSFSP 240 VNIPSYKHDI NPTMCKQSQH PTFNGDLSSN FMFSSLDMAG NAKYTAEIAS MLLNFPPALL 300 GDTDDCPDDI NFSGTQQEYG GFSAMLPQEM QGNISFGEDE EAWLRRTTNT LSASDQWGTV 360 RSVDFPFYLP ISNLTWDSLP CPSDISTSFS TNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDDKYDSDKL DDIMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIKQLD IYKYDPWDLP  60
KLSTTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYTGRAAKGV KTDWMMHEFR LPSLTNPATP KRFTDKTLPV NDSWAICRIF KKTNSMAQRA  180
LSHSWVSPIP ELNGSQIPNK NINYTHFSKE SVSCISEAGS TIQFSCNNNL QQCSPTSFSP  240
VNIPSYKHDI NPTMCKQSQH PTFNGDLSSN FMFSSLDMAG NAKYTAEIAS MLLNFPPALL  300
GDTDDCPDDI NFSGTQQEYG GFSAMLPQEM QGNISFGEDE EAWLRRTTNT LSASDQWGTV  360
RSVDFPFYLP ISNLTWDSLP CPSDISTSFS TNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein