PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026381445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 425aa MW: 47416.7 Da PI: 7.0935 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl XP_026381445.1 14 RGLWTAEEDAKILAYVSRHGTGNWTAVPKKAGLKRCGKSCRLRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.4e-15 | 69 | 110 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+el++++++ G++ W++Ia+ ++ gRt++++k++w++ XP_026381445.1 69 TFTPQEEELIIRLHATIGSR-WSLIANQLP-GRTDNDVKNFWNT 110 79******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 425 aa Download sequence |
MGRPPCCDKT NVKRGLWTAE EDAKILAYVS RHGTGNWTAV PKKAGLKRCG KSCRLRWTNY 60 LRPDLKHDTF TPQEEELIIR LHATIGSRWS LIANQLPGRT DNDVKNFWNT KLRKKLQEMG 120 IDPVTHKPIS QIIIDYGNIS GLPNKTTRFG SLNRDLRNAF MSTKPEPVSS SVTQDHSISN 180 MTSNNTSTGV DIKTPKMEPT PEMSFNNCRS SSWDLLAQIH AMQLVTGSSN NCNKNKEIVQ 240 PNYFHEGSSS SSSASSSNII NNQAGSSSPP PSYLLNPQSS LVPTTEPSSP LFSWSEFLHE 300 DAFLPSDQQQ QPQQQQQKQD LQWMSYSNGS SSIQAQHEMP KMENFKNVDE QRTSNGVREM 360 GNGNFNYMGQ QTSYHPVVNG MAGEAATGIG PSSASNNSFV KGILDQEIHD SEMLWEFPSL 420 FDDSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28470.1 | 3e-76 | MYB family protein |