PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026381444.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 425aa MW: 47416.7 Da PI: 7.0935

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026381444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl XP_026381444.1 14 RGLWTAEEDAKILAYVSRHGTGNWTAVPKKAGLKRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	46.9	6.4e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+el++++++ G++ W++Ia+ ++ gRt++++k++w++ XP_026381444.1 69 TFTPQEEELIIRLHATIGSR-WSLIANQLP-GRTDNDVKNFWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MGRPPCCDKT NVKRGLWTAE EDAKILAYVS RHGTGNWTAV PKKAGLKRCG KSCRLRWTNY 60 LRPDLKHDTF TPQEEELIIR LHATIGSRWS LIANQLPGRT DNDVKNFWNT KLRKKLQEMG 120 IDPVTHKPIS QIIIDYGNIS GLPNKTTRFG SLNRDLRNAF MSTKPEPVSS SVTQDHSISN 180 MTSNNTSTGV DIKTPKMEPT PEMSFNNCRS SSWDLLAQIH AMQLVTGSSN NCNKNKEIVQ 240 PNYFHEGSSS SSSASSSNII NNQAGSSSPP PSYLLNPQSS LVPTTEPSSP LFSWSEFLHE 300 DAFLPSDQQQ QPQQQQQKQD LQWMSYSNGS SSIQAQHEMP KMENFKNVDE QRTSNGVREM 360 GNGNFNYMGQ QTSYHPVVNG MAGEAATGIG PSSASNNSFV KGILDQEIHD SEMLWEFPSL 420 FDDSY

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MGRPPCCDKT NVKRGLWTAE EDAKILAYVS RHGTGNWTAV PKKAGLKRCG KSCRLRWTNY  60
LRPDLKHDTF TPQEEELIIR LHATIGSRWS LIANQLPGRT DNDVKNFWNT KLRKKLQEMG  120
IDPVTHKPIS QIIIDYGNIS GLPNKTTRFG SLNRDLRNAF MSTKPEPVSS SVTQDHSISN  180
MTSNNTSTGV DIKTPKMEPT PEMSFNNCRS SSWDLLAQIH AMQLVTGSSN NCNKNKEIVQ  240
PNYFHEGSSS SSSASSSNII NNQAGSSSPP PSYLLNPQSS LVPTTEPSSP LFSWSEFLHE  300
DAFLPSDQQQ QPQQQQQKQD LQWMSYSNGS SSIQAQHEMP KMENFKNVDE QRTSNGVREM  360
GNGNFNYMGQ QTSYHPVVNG MAGEAATGIG PSSASNNSFV KGILDQEIHD SEMLWEFPSL  420
FDDSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	3e-76	MYB family protein