PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380859.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 635aa    MW: 68654.2 Da    PI: 4.5347
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.28.4e-1392686311374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+ a++l++++  la +++ +m+++a+yf eALa+r+++        l p+e+ +++ se l +   f+e++P+lkf+h
  XP_026380859.1 268 LVHTLMACAEAVQQENLTVASQLVKQIGLLAVSQAGAMRKVATYFGEALARRIYS--------LYPQESLDSSFSEILEM--HFYETCPYLKFAH 352
                     689***************************************************9........55666664444444444..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae+++v+fe++ +va++l+dl+
  XP_026380859.1 353 FTANQAILEAFEGKSRVHVIDFSMKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQIAEAIHVEFEYRGFVANSLADLD 447
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseer 282
                      ++L+++p   E++aVn+v++lhrll++s+++++    vL  +k+++Pk+v++veqea+hn++ F++rf+e+l+yys+lfdsl   ++++ ++++
  XP_026380859.1 448 ASMLDIRPsdVETVAVNSVFELHRLLNRSGAIDK----VLTSIKEMKPKIVTIVEQEANHNGPVFMDRFTESLHYYSTLFDSLeGCGMSPVDSQD 538
                     ********999***************99999988....*********************************************778999999*** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +++++lgr+i+nvvaceg +r+erhe+l++W+ rle++GF p++l+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
  XP_026380859.1 539 QLMSEVYLGRQICNVVACEGIDRVERHEKLSQWKGRLESSGFAPAHLGSNAFKQASMLLALFAgGDGYRVEENNGSLMLGWHTRPLIATSAWQ 631
                     ********************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    
MKREYEESSS GGGGGLGGGG IGGGSRSGGG LYSMVESSVG GGKSKMMWDE DEQQDAVMDE  60
LLAGLGYKVK SSDMAQVAQK LEQLEMVMQV NNSNNAQEDG LLSHLSSDTV HYNPADIATW  120
LQSMLTEVNP DNFDPLSNIL PPQQQLFDDP FNNILPQQQE IPESSIITSL DFSNSRQIYE  180
ETTSDYDLRA IPGGAICEPD KKRLKPSSPP LPATTASGSG SASSSSSSAI VTVGGGGGIG  240
IGSSAASLTT ESSRPVVLVD SQEAGIRLVH TLMACAEAVQ QENLTVASQL VKQIGLLAVS  300
QAGAMRKVAT YFGEALARRI YSLYPQESLD SSFSEILEMH FYETCPYLKF AHFTANQAIL  360
EAFEGKSRVH VIDFSMKQGM QWPALMQALA LRPGGPPAFR LTGIGPPQPD NTDALQQVGW  420
KLAQIAEAIH VEFEYRGFVA NSLADLDASM LDIRPSDVET VAVNSVFELH RLLNRSGAID  480
KVLTSIKEMK PKIVTIVEQE ANHNGPVFMD RFTESLHYYS TLFDSLEGCG MSPVDSQDQL  540
MSEVYLGRQI CNVVACEGID RVERHEKLSQ WKGRLESSGF APAHLGSNAF KQASMLLALF  600
AGGDGYRVEE NNGSLMLGWH TRPLIATSAW QLDSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein