PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380490.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 265aa MW: 29853.4 Da PI: 4.6108

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++lv+ + G +W+++++ g+ R++k+c++rw +yl XP_026380490.1 14 KGPWTTEEDKKLVNFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	54.6	2.5e-17	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T++E++l +d++++lG++ W++Ia +++ gRt++++k++w+++ XP_026380490.1 69 LLTEDEEQLVIDLHARLGNR-WSKIAGRLP-GRTDNEIKNHWNTH 111 569***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGRQPCCDKL GVKKGPWTTE EDKKLVNFIL NNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL TEDEEQLVID LHARLGNRWS KIAGRLPGRT DNEIKNHWNT HIKKKLIKMG 120 INPATHEPLN KQETDTLKTT ASPLTVSQPE SEETMEKTGL VVEENLSSSP PENCTSSNES 180 GSTSDNSHEE DPIIRLAWDD EALLDSLSWD FPVPEQSYDN AGEASSAVEN GFGWLFEYQD 240 FGVEELDFGF DHVAIDMDIN TFLMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	5e-90	MYB family protein