PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026380126.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 315aa    MW: 35368.6 Da    PI: 5.99
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026380126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81.1e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEde+lv+++++ G g+W+t ++  g++R++k+c++rw +yl
   XP_026380126.1 14 KGPWNPEEDEILVNYINKNGHGSWRTLPQLAGLNRCGKSCRLRWSNYL 61
                     79********************************************97 PP
2Myb_DNA-binding50.64.5e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eE++l+++++  lG++ W++Ia+ +  gRt++++k++++++
   XP_026380126.1  67 RGPFTPEEEKLIIQLHGILGNR-WAAIAAQLE-GRTDNEIKNYFNTH 111
                      89********************.*********.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGRQPCCDKH GVKKGPWNPE EDEILVNYIN KNGHGSWRTL PQLAGLNRCG KSCRLRWSNY  60
LRPDIKRGPF TPEEEKLIIQ LHGILGNRWA AIAAQLEGRT DNEIKNYFNT HVKKRLPIMA  120
IDPLTQAPSS SAPFPITTTY SCPSMGHMTQ WESARLEAEA RLSKGSVLRD NSQSTLSTQV  180
KPEPDQYLRL WNSEVGEAFR KLTATFQSPN SSQSPNSQTS SSSKQALTPA KIKTEEKTIN  240
EQQEEMECRD SKSDVEDIVV GSESSSSINV SSDMSLQLLL DFPGCEEEMT FFQGQLATYS  300
VYHEILTENT LNCSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-100MYB family protein