PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380086.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 593aa MW: 65570.4 Da PI: 9.3888

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	60	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed l avk +Gg++Wk+Ia ++ +Rt+ qc +rwqk+l XP_026380086.1 60 KGGWTESEDSMLTAAVKTHGGKNWKKIATCFK-NRTDVQCLHRWQKVL 106 688**************************9.**********986 PP
2	Myb_DNA-binding	55.3	1.6e-17	112	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+l++++v ++G++ W+ Ia+ ++ gR +kqc++rw+++l XP_026380086.1 112 KGPWTKQEDDLILELVGKYGSKKWSIIAQSLP-GRIGKQCRERWHNHL 158 79****************************.***********97 PP
3	Myb_DNA-binding	49.3	1.1e-15	164	206	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eE+ l+++++ +G++ W+ Iar ++ gR ++++k++w+ XP_026380086.1 164 KDAWTHEEEMTLIHYHQIYGNK-WAEIARFLP-GRADNSIKNHWN 206 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MEDVKQEEGN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSLISKR TTGPTRRSKK 60 GGWTESEDSM LTAAVKTHGG KNWKKIATCF KNRTDVQCLH RWQKVLNPEL VKGPWTKQED 120 DLILELVGKY GSKKWSIIAQ SLPGRIGKQC RERWHNHLNP AIKKDAWTHE EEMTLIHYHQ 180 IYGNKWAEIA RFLPGRADNS IKNHWNCSVK KKLDSYLPSD LLKINPGVLN HENVRVDTTM 240 QGPGRTYAFD TKMLPVSRPG NHLVNLTLGN SNGGRNGEQM QPFQTIESRA LQKQVAFATK 300 PIQGADRSAT GGIPPKDLKL SIFSLSPPGQ PSEHVTSTPP HFLSLDPNPS DTRKNQAVFT 360 EDESATTAKR FPETPKRAKY CSTPNVASEH GDYRDHDGRQ SKVFNASPSH DGTGYGGLYY 420 EPPQLTSCDI LSENSRFLNS RSPVCSTPPS RLRNFSVDAS SPEAVLRSAA KSFKNTPSII 480 RKRGRQICGW APYACDSDGA CTPEVRTHGF SDINGFMESS PHAHSGREDL NSRDLLNVKW 540 LSLSTPNALE HEAAATVKSV RLEHAFDMEC DDSRAVRHSD TSSRDIKSGS IRS

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MEDVKQEEGN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSLISKR TTGPTRRSKK  60
GGWTESEDSM LTAAVKTHGG KNWKKIATCF KNRTDVQCLH RWQKVLNPEL VKGPWTKQED  120
DLILELVGKY GSKKWSIIAQ SLPGRIGKQC RERWHNHLNP AIKKDAWTHE EEMTLIHYHQ  180
IYGNKWAEIA RFLPGRADNS IKNHWNCSVK KKLDSYLPSD LLKINPGVLN HENVRVDTTM  240
QGPGRTYAFD TKMLPVSRPG NHLVNLTLGN SNGGRNGEQM QPFQTIESRA LQKQVAFATK  300
PIQGADRSAT GGIPPKDLKL SIFSLSPPGQ PSEHVTSTPP HFLSLDPNPS DTRKNQAVFT  360
EDESATTAKR FPETPKRAKY CSTPNVASEH GDYRDHDGRQ SKVFNASPSH DGTGYGGLYY  420
EPPQLTSCDI LSENSRFLNS RSPVCSTPPS RLRNFSVDAS SPEAVLRSAA KSFKNTPSII  480
RKRGRQICGW APYACDSDGA CTPEVRTHGF SDINGFMESS PHAHSGREDL NSRDLLNVKW  540
LSLSTPNALE HEAAATVKSV RLEHAFDMEC DDSRAVRHSD TSSRDIKSGS IRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-90	MYB family protein