PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380085.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 594aa MW: 65657.4 Da PI: 9.3888

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	61	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed l avk +Gg++Wk+Ia ++ +Rt+ qc +rwqk+l XP_026380085.1 61 KGGWTESEDSMLTAAVKTHGGKNWKKIATCFK-NRTDVQCLHRWQKVL 107 688**************************9.**********986 PP
2	Myb_DNA-binding	55.3	1.6e-17	113	159	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+l++++v ++G++ W+ Ia+ ++ gR +kqc++rw+++l XP_026380085.1 113 KGPWTKQEDDLILELVGKYGSKKWSIIAQSLP-GRIGKQCRERWHNHL 159 79****************************.***********97 PP
3	Myb_DNA-binding	49.3	1.1e-15	165	207	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eE+ l+++++ +G++ W+ Iar ++ gR ++++k++w+ XP_026380085.1 165 KDAWTHEEEMTLIHYHQIYGNK-WAEIARFLP-GRADNSIKNHWN 207 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MEDVKQEEGN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSSLISK RTTGPTRRSK 60 KGGWTESEDS MLTAAVKTHG GKNWKKIATC FKNRTDVQCL HRWQKVLNPE LVKGPWTKQE 120 DDLILELVGK YGSKKWSIIA QSLPGRIGKQ CRERWHNHLN PAIKKDAWTH EEEMTLIHYH 180 QIYGNKWAEI ARFLPGRADN SIKNHWNCSV KKKLDSYLPS DLLKINPGVL NHENVRVDTT 240 MQGPGRTYAF DTKMLPVSRP GNHLVNLTLG NSNGGRNGEQ MQPFQTIESR ALQKQVAFAT 300 KPIQGADRSA TGGIPPKDLK LSIFSLSPPG QPSEHVTSTP PHFLSLDPNP SDTRKNQAVF 360 TEDESATTAK RFPETPKRAK YCSTPNVASE HGDYRDHDGR QSKVFNASPS HDGTGYGGLY 420 YEPPQLTSCD ILSENSRFLN SRSPVCSTPP SRLRNFSVDA SSPEAVLRSA AKSFKNTPSI 480 IRKRGRQICG WAPYACDSDG ACTPEVRTHG FSDINGFMES SPHAHSGRED LNSRDLLNVK 540 WLSLSTPNAL EHEAAATVKS VRLEHAFDME CDDSRAVRHS DTSSRDIKSG SIRS

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MEDVKQEEGN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSSLISK RTTGPTRRSK  60
KGGWTESEDS MLTAAVKTHG GKNWKKIATC FKNRTDVQCL HRWQKVLNPE LVKGPWTKQE  120
DDLILELVGK YGSKKWSIIA QSLPGRIGKQ CRERWHNHLN PAIKKDAWTH EEEMTLIHYH  180
QIYGNKWAEI ARFLPGRADN SIKNHWNCSV KKKLDSYLPS DLLKINPGVL NHENVRVDTT  240
MQGPGRTYAF DTKMLPVSRP GNHLVNLTLG NSNGGRNGEQ MQPFQTIESR ALQKQVAFAT  300
KPIQGADRSA TGGIPPKDLK LSIFSLSPPG QPSEHVTSTP PHFLSLDPNP SDTRKNQAVF  360
TEDESATTAK RFPETPKRAK YCSTPNVASE HGDYRDHDGR QSKVFNASPS HDGTGYGGLY  420
YEPPQLTSCD ILSENSRFLN SRSPVCSTPP SRLRNFSVDA SSPEAVLRSA AKSFKNTPSI  480
IRKRGRQICG WAPYACDSDG ACTPEVRTHG FSDINGFMES SPHAHSGRED LNSRDLLNVK  540
WLSLSTPNAL EHEAAATVKS VRLEHAFDME CDDSRAVRHS DTSSRDIKSG SIRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-90	MYB family protein