PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026379808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 341aa MW: 38866.9 Da PI: 5.6407 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l ++++ G g+W+ ++ + g+ R++k+c++rw +yl XP_026379808.1 14 RGLWSPEEDEKLTHYITNNGYGCWSEVPDRAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.6 | 2.5e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l+++++ G++ W+ Ia++++ gRt++++k++w+++ XP_026379808.1 67 RGRFTPEEEKLIIKLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 341 aa Download sequence |
MGQHSCCNQQ KVKRGLWSPE EDEKLTHYIT NNGYGCWSEV PDRAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIK LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WITKKVTRKS 120 SSSPSLISLP TSSSVLPNYS NELLQQSSNY SMDTQVDLLT NTTNLQDHST LLLQETNAFP 180 LFMFDPGLVS NISNNILDVE QHNDDNNNNG IHVPKSWKST AEHDRETTLL PLHPLPVCNN 240 FSAGIVSDEN YMASTSYYSD ESHLNHHNMV PATDIGMDYL QRQDHELMIN DSEAWVENDH 300 QQQHGPASFL IWENFEGQIS GEGSSNMQDI LSSSYPPSSY F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G63910.1 | 6e-78 | MYB family protein |