PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379491.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 341aa    MW: 38859.5 Da    PI: 6.6091
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.81.9e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++q G+g+W++++   g+ R+ k+c++rw +yl
   XP_026379491.1 14 KGPWTPEEDIILVSYIQQNGPGNWRLVPTNTGLMRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.97.2e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+e ++++  +lG++ W++Ia++++  Rt++++k++w+++l
   XP_026379491.1  67 RGNFTPHEEEMIIHLQSLLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ QNGPGNWRLV PTNTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEEMIIH LQSLLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKINKFQ  120
STLNPPSPPL HQVIASNSTV FAHRHHDLCY TDKSDDQSTT NLSLLLDHHI MINHGTTTTT  180
SSGGATYASS TENISRLLEG WMRSSPKLNS NKKYILPNTS PPIESNKEEE TGNKLHHHEQ  240
ESCDIISSSH EDFDSLLSFE NMNCNIPWEK LSASSNDIDL DQKMRSFPEI NTIQNLVENG  300
QQQQQQPFRL FEKWLLDEAA INQGIIELSS LNDDHSFGHD M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-88MYB family protein