PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379271.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 512aa MW: 57695.7 Da PI: 7.9229

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.5	6.6e-40	213	364	3	130
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........................ssssas 71 kkdrhski T++g+RdRR+Rls+++a+ fF++qd+LGfdk+skt+eWLl++ k++i el ++ + ssas XP_026379271.1 213 SKKDRHSKIVTAQGPRDRRMRLSLKVARPFFAIQDMLGFDKASKTVEWLLTNCKEEINELKRSlrisdeddtvmtaainkrsscsrggkNVSSAS 307 69********************************************************************99999988888888877777777 PP TCP 72 eceaesssssasnsssgkaaksaakskksqksaasalnlakesrakarararertrekm 130 +ce +s+ ++nsss+ + +++ k+ ++ ++++ ++ akesrakarararert k XP_026379271.1 308 DCEVVSEIDVSNNSSSN-NLRKE-KRVRPLRKPTFHHPQAKESRAKARARARERTMGKI 364 88444444443333333.23333.44445555555777799************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MFLSNNSRIS STSSSRNNIS CGYSCCCYNN DHQHQPLFDR PLYVCPNNNN HINNNFRQSH 60 HHQPPPPSAS SPPKQSQSLT FYPFSPTYFD QNSEENDIEI LEQPYHHQEI HFNHHHLNPQ 120 QQQEQPLLFS SSTTTAAANL HTTTATLLEG GPNSTLGVAN KDNITNMINK DNVDWGGSGD 180 FNKMNKKCST NLKMSEKKLV STTWNNSKMC SKSKKDRHSK IVTAQGPRDR RMRLSLKVAR 240 PFFAIQDMLG FDKASKTVEW LLTNCKEEIN ELKRSLRISD EDDTVMTAAI NKRSSCSRGG 300 KNVSSASDCE VVSEIDVSNN SSSNNLRKEK RVRPLRKPTF HHPQAKESRA KARARARERT 360 MGKIWSKSVM PASTSNNNYL YNHNSLTMNQ LATSTSPFEF ETGDESGSQS QDMKCSLDVV 420 AEAEEPISHS PSLEESIVIT GNSSSPAQIY NYHHHELVKT SNTLNLNNNY SFWDIDNTNE 480 ISSFCATSAN IHLPTAAFNN FDKPWTYNNE SS

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MFLSNNSRIS STSSSRNNIS CGYSCCCYNN DHQHQPLFDR PLYVCPNNNN HINNNFRQSH  60
HHQPPPPSAS SPPKQSQSLT FYPFSPTYFD QNSEENDIEI LEQPYHHQEI HFNHHHLNPQ  120
QQQEQPLLFS SSTTTAAANL HTTTATLLEG GPNSTLGVAN KDNITNMINK DNVDWGGSGD  180
FNKMNKKCST NLKMSEKKLV STTWNNSKMC SKSKKDRHSK IVTAQGPRDR RMRLSLKVAR  240
PFFAIQDMLG FDKASKTVEW LLTNCKEEIN ELKRSLRISD EDDTVMTAAI NKRSSCSRGG  300
KNVSSASDCE VVSEIDVSNN SSSNNLRKEK RVRPLRKPTF HHPQAKESRA KARARARERT  360
MGKIWSKSVM PASTSNNNYL YNHNSLTMNQ LATSTSPFEF ETGDESGSQS QDMKCSLDVV  420
AEAEEPISHS PSLEESIVIT GNSSSPAQIY NYHHHELVKT SNTLNLNNNY SFWDIDNTNE  480
ISSFCATSAN IHLPTAAFNN FDKPWTYNNE SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-24	TCP family protein