PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026379051.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 302aa    MW: 34053.6 Da    PI: 5.6403
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026379051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++v q+G g+W+tI+ + g+ R +k+c++rw +yl
   XP_026379051.1 16 KGLWSPEEDQRLRNYVLQHGHGCWSTIPIRAGLQRNGKSCRLRWVNYL 63
                     678*******************************************97 PP
2Myb_DNA-binding61.71.5e-1969114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T eE+e +v ++++lG++ W+ Ia++++ gRt++++k++w++yl
   XP_026379051.1  69 RGTFTSEEEETFVALHRLLGNK-WSQIAQHLP-GRTDNEIKNYWNSYL 114
                      899*******************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MMGCKTCENP KMKHKKGLWS PEEDQRLRNY VLQHGHGCWS TIPIRAGLQR NGKSCRLRWV  60
NYLRTGLRRG TFTSEEEETF VALHRLLGNK WSQIAQHLPG RTDNEIKNYW NSYLKKKLMK  120
AGEFNKNQSV NSDFDEFKST SASAASTGTS STRISSAGSF ESSEQIGGTG NDQLSSTTAS  180
NSKPVQESNQ SFLPKVFFAE WLFLDQDHSE NGSNSGNSNL APEEILDDSS VFTGGISEEF  240
LPQEEVYGSE FDNGLLHNSG SRYVQFCPKV EEPENLGTDF MNYGNIAEIH REFTMLSNDM  300
FY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.16e-58MYB family protein