PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026378079.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 331aa    MW: 37665.1 Da    PI: 5.9188
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026378079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.2e-1675122148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+WT +Ed+llv+++  +G ++W+  a+  g++Rt+k+c++rw++yl
   XP_026378079.1  75 RGPWTLDEDKLLVHYISCHGDRRWNHLAKSSGLKRTGKSCRLRWLNYL 122
                      89********************************************97 PP
2Myb_DNA-binding482.8e-15128171146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE+ l++++  +lG++ W++Ia++++ gRt++++k++w++
   XP_026378079.1 128 RGNLTIEEQILIIQLQSKLGNR-WSRIAKHLP-GRTDNEIKNYWRT 171
                      788999****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MPPKREYLEI LDFEMQCGCM CSNILHYQYN LSLASVAANF STSVVRSNVN FHEDEEEEEN  60
ENGVLIHDDE DELRRGPWTL DEDKLLVHYI SCHGDRRWNH LAKSSGLKRT GKSCRLRWLN  120
YLKPDVKRGN LTIEEQILII QLQSKLGNRW SRIAKHLPGR TDNEIKNYWR TRVQKQERQR  180
LKFDPNNMPA LVPDHAMGCF APRTTMDIIG DMNCNTSQAL VNNTASCTSS TSSLVPNSTI  240
SISRAFVDTS GDSGHHNTHT TNNGTAEYDI NGSAFPKAID CSYQMINDCG NVYDYMDALI  300
NLGNSISSRC HITEDNAVLD DQTAINDLWK W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-51MYB family protein