PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377435.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 593aa MW: 65810.7 Da PI: 6.6209

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.4	5.8e-12	36	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l + v+ + g +Wk Ia+ ++ +t+ qc +rw k+l XP_026377435.1 36 KGGWTAEEDDYLRRSVEAYRGQNWKIIASGLP-DKTAVQCLNRWKKVL 82 688***************************.**********976 PP
2	Myb_DNA-binding	57.4	3.3e-18	88	134	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v ++G+ W+ + + m+ gR +kqc++rw++yl XP_026377435.1 88 KGTWTPEEDRKLIELVSEYGPIKWSVVEKSMP-GRMGKQCRERWFNYL 134 799***************99******.***********97 PP
3	Myb_DNA-binding	30.6	7.6e-10	140	178	1	41
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 +++WT+ E + +v+a + +G+ W Ia+ ++ gRt++ +k XP_026377435.1 140 KDAWTEYEKLAIVKAQQIYGNQ-WVEIAKLLP-GRTENAIK 178 679***************99.*****.***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MAEAEIEIPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRRS VEAYRGQNWK 60 IIASGLPDKT AVQCLNRWKK VLNPNVNKGT WTPEEDRKLI ELVSEYGPIK WSVVEKSMPG 120 RMGKQCRERW FNYLDPTIKK DAWTEYEKLA IVKAQQIYGN QWVEIAKLLP GRTENAIKCL 180 WKCSLKNKLD FYLSAEQFPP DLKTGEDKGL NASAESCLGN ENSIRNLCNA PLQKNLDTHL 240 STERLPSFGS VLTTGEDNAI LDSDLSTEQS PSVGSVLNMR GDYAKKTKSL VVGNSAVCND 300 KGFSAATRSC LGNGDTVKNP WNNSLMENFG FHLSTGQLPP ADTILKTEDY ALQISISPVA 360 GKMNGRNNEG FYAGTQCSLG NEDFYNVDEN HMDLVEPSTP EFLDTEDPAG VLATDSSNSL 420 GRGCRQLASE HGFGRSNSKS NLVKYRSIAD IERSIVGTPS PISVPVTGSF NQETSGLTSV 480 SSSTVCVPPA CINNLVSQRV KSVLKDAAQN FSNLPSILSK RKRQATGTRN RNEHIKQVQD 540 EESSHSLELE KADNSKEKPA SMVVNLENQN TSCHENSTIR LFYTRKAYGL RQN

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MAEAEIEIPY CSENKESNMS EEEEAKRRIG PVRCRKGGWT AEEDDYLRRS VEAYRGQNWK  60
IIASGLPDKT AVQCLNRWKK VLNPNVNKGT WTPEEDRKLI ELVSEYGPIK WSVVEKSMPG  120
RMGKQCRERW FNYLDPTIKK DAWTEYEKLA IVKAQQIYGN QWVEIAKLLP GRTENAIKCL  180
WKCSLKNKLD FYLSAEQFPP DLKTGEDKGL NASAESCLGN ENSIRNLCNA PLQKNLDTHL  240
STERLPSFGS VLTTGEDNAI LDSDLSTEQS PSVGSVLNMR GDYAKKTKSL VVGNSAVCND  300
KGFSAATRSC LGNGDTVKNP WNNSLMENFG FHLSTGQLPP ADTILKTEDY ALQISISPVA  360
GKMNGRNNEG FYAGTQCSLG NEDFYNVDEN HMDLVEPSTP EFLDTEDPAG VLATDSSNSL  420
GRGCRQLASE HGFGRSNSKS NLVKYRSIAD IERSIVGTPS PISVPVTGSF NQETSGLTSV  480
SSSTVCVPPA CINNLVSQRV KSVLKDAAQN FSNLPSILSK RKRQATGTRN RNEHIKQVQD  540
EESSHSLELE KADNSKEKPA SMVVNLENQN TSCHENSTIR LFYTRKAYGL RQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	6e-74	MYB family protein