PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026377344.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 436aa MW: 48130.2 Da PI: 8.4975

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026377344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.2	3.7e-41	129	205	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls+++eyhrrhkvCe+hsk+p+vlv+g+eqrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ XP_026377344.1 129 CLVDGCNADLSKCREYHRRHKVCEAHSKTPKVLVAGQEQRFCQQCSRFHFLVEFDEVKRSCRKRLDGHNRRRRKPQP 205 **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MDWEFKGTSW GFGEFQRDCS EHSNFTASTN TNSASAINTL AGSSSSGGDN NNLKQKNRSR 60 DNNNCSVDLK LGRLADFGEV YAMNHNKWKD PRLTMFSTSS SSAAAATALS SVKRARSSSS 120 SNGVQVPSCL VDGCNADLSK CREYHRRHKV CEAHSKTPKV LVAGQEQRFC QQCSRFHFLV 180 EFDEVKRSCR KRLDGHNRRR RKPQPDPLSA NSVNLFSYHQ GTRILPFANP QVFPSTTVTS 240 PSWHAVVKTE EEIITDSNHL QSHYANRQNM FPGSFSRTNK EGKQFPFLQA NEHGNRMVPE 300 VSSCQPLINN VAACSENISS NSRKLFSDGL TRILDSDCAL SLLSSPPSQQ RSGSSLSHVV 360 QSDSIPMSQP LVPDLEQYNQ QGLSRYHQSR QGMGGETIGS VLVSHATDAE LNCQGLFHMG 420 PNGNGSSQNG IPFSWE

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MDWEFKGTSW GFGEFQRDCS EHSNFTASTN TNSASAINTL AGSSSSGGDN NNLKQKNRSR  60
DNNNCSVDLK LGRLADFGEV YAMNHNKWKD PRLTMFSTSS SSAAAATALS SVKRARSSSS  120
SNGVQVPSCL VDGCNADLSK CREYHRRHKV CEAHSKTPKV LVAGQEQRFC QQCSRFHFLV  180
EFDEVKRSCR KRLDGHNRRR RKPQPDPLSA NSVNLFSYHQ GTRILPFANP QVFPSTTVTS  240
PSWHAVVKTE EEIITDSNHL QSHYANRQNM FPGSFSRTNK EGKQFPFLQA NEHGNRMVPE  300
VSSCQPLINN VAACSENISS NSRKLFSDGL TRILDSDCAL SLLSSPPSQQ RSGSSLSHVV  360
QSDSIPMSQP LVPDLEQYNQ QGLSRYHQSR QGMGGETIGS VLVSHATDAE LNCQGLFHMG  420
PNGNGSSQNG IPFSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	203	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	9e-56	SBP family protein