PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995246.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 298aa    MW: 33120.8 Da    PI: 5.2164
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-1789136253
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     + +GVr +k +g+W+AeIrd + +   rkr++lg+f taeeA ka+ a ++++
  XP_024995246.1  89 KLTGVRLRK-WGKWAAEIRDpF-T---RKRIWLGTFNTAEEASKAYMAKKQEF 136
                     678****99.**********55.3...4******************9998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MADHRVSKRL RYSSNNKEEQ LEVTGQNLRK IRVICSDPEA TDSSSDEADS GERSSPRRIV  60
FEIVIGVKPE EGDETVEHKD SMDQTVRKKL TGVRLRKWGK WAAEIRDPFT RKRIWLGTFN  120
TAEEASKAYM AKKQEFQARL STQTRPKSDG ESSTRLSQDP GQEPTRESYK GVHRAKMDGT  180
CDPEEEGSSA LQYKKVEFGS EYVTRLESGS SIKSPKIETL SLLSNGGGET ISGSTTTSME  240
VSGEEKGASA TMVEGQNVNT EEGNKPPWLG LDIGMLVIDN NGNLLGQFSR LDDEMRIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-20ERF family protein