PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995111.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 294aa    MW: 32052.8 Da    PI: 9.0018
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.33.9e-334399358
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                     v Y+eClkNhAas+Ggha+DGCgEfmps++ + +++++lkCaACgCHRnFHRr ++
  XP_024995111.1 43 VVAYRECLKNHAASIGGHALDGCGEFMPSPTCSpTEPTSLKCAACGCHRNFHRRGST 99
                    689****************************999********************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDLKHPTTEI PDPESETPLH PQSIKLLSFS NGKTNHHPPP PTVVAYRECL KNHAASIGGH  60
ALDGCGEFMP SPTCSPTEPT SLKCAACGCH RNFHRRGSTN DFAATATRST HFIEFNRHPH  120
QTSTSTSPSP PSPSPQPTNY AYGPHLLLSL STAADQNHTV ATPGTPIPIK IDNAGGRKRF  180
RTKFSQDQKE KMLLFAEKVG WKMQRCGDKM VTDFCNEIGI RRGIFKVWMH NNKNTFRKRD  240
KDINSPTTAT ATATTTTTNV AAGVVRSNDS THQENGSGDL HLHQASTNGS CSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.14e-58ZF-HD family protein