PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992797.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 262aa    MW: 28924.8 Da    PI: 7.4178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.7e-1888137356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g+
  XP_024992797.1  88 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAIAIKGH 137
                     9****998.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MENASQDNHF SSSTTTSSSS TTTTTTGCSS VSSIFTSDAS TVQIITCGEI DNKSQKGLKR  60
VQKGNDGNER KKQSRNDAGG GASEHLTYRG VRMRSWGKWV SEIREPRKKS RIWLGTFPTA  120
EMAARAHDVA AIAIKGHSAY LNFPKLAHLL PRPTTISPKD IREAANKAAT TCGGHEPEPP  180
SQPTLSHSHS STTLSSNNTQ KSITSTSIEY DDTFFDLPDL SVNNTDRNDT FHFYPPSWQL  240
EVEADKGFRI EVEEPFHWHI SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-45ERF family protein