PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024991739.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 296aa MW: 31969.6 Da PI: 9.4734

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024991739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	66	126	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+a+kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkkss XP_024991739.1 66 PETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSS 126 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MVFSSLPSYL DPPNWPQQQV GGVGGDHEIS QLPPPLLPPP PPLGSGGDAR SVQMSERARM 60 GKLPQPETAM KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR 120 RNKKSSKGSR GSRSKSPSAT TSSTSNTAIS PNSCTTDILG HLPHNTRPSQ FPILPPLNHF 180 GGGDLGLTFA GGNGNNLIHL GHDSNYPSNK FAQFPFLEAA NAGMYGEGPS NYGGQVGGMK 240 MEDNHHRHHQ QQGLNLSRNF MDIPGNEQFL GTSNVAWSTT DLSGFNSSST TTTHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	4e-38	Dof family protein