PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989569.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 351aa    MW: 38697.5 Da    PI: 7.1791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.3e-1760109255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_024989569.1  60 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 109
                     59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEEAMRRLAG FTASSESDLF QPPNPTVQKR CNTTTPTTTN SAANKRAALK DSNGTNGSMR  60
YRGVRRRPWG RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGS KARTNFVYPP  120
SPNDTLINPF AFNKSQLPAP ATAPSSAYDN FAVPTLQRNT ASFNSLLFHD FFNSGSSSSY  180
CNPNPNPNPN TNPNLSSGST PAIVVHASKG STTPSINQDD YKEFFPSEPD HSGLLDEVLT  240
GFYPKPNNQS KPEPKPKPQP DRDLTHELKK TVESNHFGFF FENQSGFSAA TMNSQQNQFD  300
LDQGFNGGGG LPFYSHHSPA PVTFDSQESI FQDVFQYPDF VGLFAARLQN A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.11e-14ERF family protein