PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989215.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 268aa    MW: 30611.5 Da    PI: 5.3809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.5e-16101150255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr+++ +grWvAeI+dp +   + r +l +++t eeAa+ +++ + kl+g
  XP_024989215.1 101 KFGGVRQRP-WGRWVAEIMDPAT---CHRLWLVTYDTVEEAARVYDNVAIKLHG 150
                     788******.**********854...7*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEVPAMTDKF SNQEKSPCPR LMRISMTDLY ATDSSGDEDE EHFGRWFVKK YVNEINIQKS  60
CKTKMMPVNR KMTVTRNSPS ALEAKQKAMK KKRNSAGNVR KFGGVRQRPW GRWVAEIMDP  120
ATCHRLWLVT YDTVEEAARV YDNVAIKLHG LGAVTNFVMP TVLENPTPVN VTSMSNHHSN  180
LKSHKLPFVD APPFDYQSFD LIEFSDEFPS FNMHDDFGYI DPNRFDDFGT ISFVDDFIPD  240
TGCGSSSTLQ IENYFEDISD STLDSWLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-35ERF family protein