PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989128.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 159aa    MW: 18117.6 Da    PI: 9.6844
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.4e-1663113255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ AeIr p++  k++r +lg+f+ +e+Aa a+++a+ k++g
  XP_024989128.1  63 QYRGVRRRS-WGKFYAEIRIPKK--KNTRLWLGTFDAPEKAALAYDKAAFKFHG 113
                     59****887.**********965..35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MQIEMSQSKD LNVSQDGLFS LEKKELGGIC LNFIGKCETE SQCSKKTKRQ VADKDHGSEE  60
WMQYRGVRRR SWGKFYAEIR IPKKKNTRLW LGTFDAPEKA ALAYDKAAFK FHGRRAKVNF  120
PHLIVSHDDQ VTVHEPHSLI SSSLSAERSV VEPSSGYTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-29ERF family protein