PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989126.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 334aa    MW: 37446.1 Da    PI: 4.8713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-17226276255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++ Ae r p +     r +lg++ t+eeAa a+++a+ k +g
  XP_024989126.1 226 RYRGVRRRP-WGKYTAEMRNPEKK--GSRLWLGTYETPEEAAMAYDRAAFKHRG 276
                     8********.*******9997443..4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MFTQAELYQS HLESIRKHLL DDHCELFPDI HQNPSSFPGY NFDDWSFLEN SDESSEKMEE  60
ISTSFMGLSS WDSSEMYSPG SNLISPYTVD DHVEPSLNLD DFDMYSILDD NSDRNLQVSR  120
SQHNTTEMFP DTNIEFTEIP AVSNEAQPEF FVATVANLSG ISNTTEGAAS KPLNWDFSTG  180
HVIGFDDEAF SGGKDDLDAV TLMGGCFAED GDVIPAKQLP FIPDKRYRGV RRRPWGKYTA  240
EMRNPEKKGS RLWLGTYETP EEAAMAYDRA AFKHRGSNAL LNFPHLIGSH HENPKKHTTK  300
NRDAANKSRS SSSSSSSSES SKKINRKKGK NSAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-32ERF family protein