PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024988729.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 213aa MW: 23655.1 Da PI: 7.3756

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024988729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.3	7.2e-33	43	97	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl XP_024988729.1 43 KPRLRWTADLHDRFVDAVSQLGGPSKATPKAIMRAMGVKGLTLFHLKSHLQKYRL 97 79****************************************************8 PP
2	Myb_DNA-binding	65.5	9.6e-21	45	96	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav qlGg+ t+k+I+r mg kg+tl ++ks++qky+ XP_024988729.1 45 RLRWTADLHDRFVDAVSQLGGPskaTPKAIMRAMGvKGLTLFHLKSHLQKYR 96 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MYHHHSSRLI QPGEACIDVA SLHRAIGVGL GGDPCLLLTS DPKPRLRWTA DLHDRFVDAV 60 SQLGGPSKAT PKAIMRAMGV KGLTLFHLKS HLQKYRLGKQ SGKGLCEPNN DGLSGLYHME 120 SPQVMCSSQS LETTHVNEGY EVKEALRAQM EVESRLHLQV EAEKHLQKHQ DAEKRYLIML 180 EKACKMLADQ IIGSEEMNGS QTEYAEAEKR SGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	5e-62	G2-like family protein