PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024988303.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 307aa MW: 34481.6 Da PI: 6.4406

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024988303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.5	2.7e-32	20	74	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFv+ v+qLGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl XP_024988303.1 20 KPRLKWTPELHQRFVDSVTQLGGPEKATPKSLMRVMGIHGLTLYHLKSHLQKYRL 74 79****************************************************8 PP
2	Myb_DNA-binding	61.4	1.9e-19	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++vd v+qlGg+ t+k+ +r mg g+tl+++ks++qky+ XP_024988303.1 22 RLKWTPELHQRFVDSVTQLGGPekaTPKSLMRVMGiHGLTLYHLKSHLQKYR 73 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MAHQNIQNQD LNLVLSSDAK PRLKWTPELH QRFVDSVTQL GGPEKATPKS LMRVMGIHGL 60 TLYHLKSHLQ KYRLGKIQQS PACSGNMQEE FADDHRSDIT SIDHNDETPN QINDLKIAQA 120 LQMQMEVQRK LHEQIEVQRH LQLRIEAQGK YLQSVLRKAQ DTLAGYNSSA IEVEAAKAEL 180 SHLVSMVDNG CPNSLSVLTE LDDSTLKKEV EKNPKALTIG SSLESSLTSS ESSGRRENDD 240 HVVLSLMEMN PPAKNGRKRS GSTISDGNCE GKRLQKDSKR FDLNSQYVND FDFDFESRSN 300 TLDLNSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.2	4e-74	G2-like family protein