PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986748.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family EIL
Protein Properties Length: 582aa    MW: 65014.9 Da    PI: 5.4454
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3418.28.7e-128403801314
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     e+l++rmwkd+++lkr+ke++k l   +++ +g++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd+LraWW
  XP_024986748.1  40 EDLERRMWKDRIKLKRIKEKQKILA--QQT-AGKQKAKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNLRAWW 131
                     89***************99999754..554.89************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky++ + i++g+ +l  ++  +++ l++lqD+tlgSLLs+lmqhcdppqr+fplekg++pPWWPtG e+ww +l l+k  
  XP_024986748.1 132 KEKVKFDKNGPAAIAKYDS-ECISKGQIGL--QNGGSNSILQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGLPPPWWPTGGEDWWTRLRLPKGE 223
                     *****************75.6788989999..56889999******************************************************9 PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...........XXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...........slrkqspkv 274
                     + ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+++ + s ++             l  ++++ 
  XP_024986748.1 224 S-PPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREEALILQSSGDNGgsaitetpsggCL--EKNRP 315
                     9.9****************************************************************999999444556655443222..66667 PP

                     XXXXXXXXXXX.XXXXXX.XXXXXXXXXX........................XXXXXXXXXXXX CS
            EIN3 275 tlsceqkedve.gkkeskikhvqavktta........................gfpvvrkrkkkp 314
                       s ++++dv   ++    + ++++++++                        +  + +krk+++
  XP_024986748.1 316 SNSYDSDYDVYgFEDGGAASVSSKDDRRQprkdaeqsghsrdppppvpdkeqpQPRAEKKRKREK 380
                     77777888888633333333344444444666777778888887777776654333333333222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MDDLVMDTNG LGDGSDIEGD DIRCENIAEK DVSDEEIDAE DLERRMWKDR IKLKRIKEKQ  60
KILAQQTAGK QKAKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV  120
SGSSDNLRAW WKEKVKFDKN GPAAIAKYDS ECISKGQIGL QNGGSNSILQ DLQDATLGSL  180
LSSLMQHCDP PQRKFPLEKG LPPPWWPTGG EDWWTRLRLP KGESPPYKKP HDLKKMWKVG  240
VLTAVIKHMS PNIAKIRRLV RQSKCLQDKM TAKESSIWLA VLSREEALIL QSSGDNGGSA  300
ITETPSGGCL EKNRPSNSYD SDYDVYGFED GGAASVSSKD DRRQPRKDAE QSGHSRDPPP  360
PVPDKEQPQP RAEKKRKREK SKPSQEQLVD GLPDINQADV SLVDYPMQEN IPEDHPLTAV  420
RPLAATNGTE VQIPPNMLLY PPVQESEYRP QGLGITNGHE VAGVHHGPQS SELHPLVPYS  480
LYMPPIEEQQ PVHEFQIRPE YSGVHAPESQ PHRDENSNAI PGGFHNDHEQ PVDNQFESSI  540
NSLSLDYPGF NSPFNLGLDA TTSLDPDLDF LLDDDLIQYF GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-164EIL family protein