PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024985467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 254aa MW: 28928.5 Da PI: 6.1906 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 93.5 | 2.7e-29 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkwe+tk+++eH+H+l+p XP_024985467.1 89 FYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKRE--KVVRQRAETRVGCRAMILVRKVSSGKWEITKFVKEHTHPLTP 176 ******************************************9988..999************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDFEVDDDVN GEVLVNSADV EGRTVDDDGT VGCSVVGIFQ DDHDIKIDQD ELERGIDPLD 60 EPHAVNGSLL GAEPYLGQEF ESEAAAHAFY NAYATRVGFV IRVSKLSRSR RDGTAIGRAL 120 VCNKEGFRMP DKREKVVRQR AETRVGCRAM ILVRKVSSGK WEITKFVKEH THPLTPGKGR 180 RDLIYDQYPN EHDKIRELSQ QLAIEKRRAA TYKRHLEMVF EHIEEHNQSL SKKIKDIVNS 240 VKEMESNELL QSHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-92 | FAR1 family protein |