PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024984886.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 189aa    MW: 20778.2 Da    PI: 9.2936
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024984886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000195981123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F ++  L  H++ H
  XP_024984886.1 59 FECQYCKRDFANSQALGGHQNAH 81
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGENSSSPTG RNFSDFINQN ASFSSSSSVM KLFGVAVTDG GIAPTSTTPQ PDIDTNKRFE  60
CQYCKRDFAN SQALGGHQNA HKKERQRLKR VHFMSNHRRF AAPVTILNAH ATRSVQFQQP  120
QMAVVDHYIC PPSAPQVLSG VPLRLPSRFY IGRPSQFNAT AGVSRNSSRM IEEAADEING  180
DGVDVDLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-14C2H2 family protein