PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024983592.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 365aa MW: 39752.8 Da PI: 7.1234

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024983592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128	2.7e-40	47	107	3	63
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_024983592.1 47 EQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 107 7899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MEVEMDASGV VHHHHHHHHQ QELSSQTLES MLVCTKAQQE KKPRPAEQAL KCPRCDSTNT 60 KFCYYNNYSL TQPRYFCKSC RRYWTKGGTL RNVPVGGGCR KNKRSSSSSS SATSSNSTSS 120 SKIRGTHDHL LNQQHHNIIT SNSNNTLLSG LPHLPYDSNC TDLSLAFARL QSQANGHLGF 180 DHFDQNPNSS HTPTHQADHL GFLDAIRGGF LGNLPNGYHN MIYNGGNAGN GDMGSVENGG 240 ILMGLTNASS DHDHDLDQEI MNPMFHDHHN QEHLVNNNGA SGAATTALMM AAMKQESTCH 300 GRSELGENRG SSGGVLWGFP WMMGAGGGDQ GMNMVHEVES GRSQIAGWNG LGSTAWHGLL 360 NSPLM

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MEVEMDASGV VHHHHHHHHQ QELSSQTLES MLVCTKAQQE KKPRPAEQAL KCPRCDSTNT  60
KFCYYNNYSL TQPRYFCKSC RRYWTKGGTL RNVPVGGGCR KNKRSSSSSS SATSSNSTSS  120
SKIRGTHDHL LNQQHHNIIT SNSNNTLLSG LPHLPYDSNC TDLSLAFARL QSQANGHLGF  180
DHFDQNPNSS HTPTHQADHL GFLDAIRGGF LGNLPNGYHN MIYNGGNAGN GDMGSVENGG  240
ILMGLTNASS DHDHDLDQEI MNPMFHDHHN QEHLVNNNGA SGAATTALMM AAMKQESTCH  300
GRSELGENRG SSGGVLWGFP WMMGAGGGDQ GMNMVHEVES GRSQIAGWNG LGSTAWHGLL  360
NSPLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-40	Dof family protein