PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024981636.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 529aa MW: 59998.3 Da PI: 7.5723

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024981636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.2	7.6e-10	350	382	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ ++++ LAk++gL+ +qV++WF N R + XP_024981636.1 350 HPYPTDTDKQILAKQTGLSRNQVSNWFINARVR 382 89*****************************88 PP
2	BELL	89	4.9e-29	215	280	7	72
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +k+++L+sll+eV+krYk+y++q+q+vi sFe+v gl sa+p+++l lka+S++FrcL +ai++q+ XP_024981636.1 215 RKRSRLISLLDEVYKRYKHYYQQIQAVITSFETVSGLSSAAPFANLDLKAMSKNFRCLNNAITDQL 280 799************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MAEGFEPYHI PQQSRREKLR VVTTGCVGDL LPLYDQSSFI SSSPNLLSKQ PRNITSSLMA 60 TATSNSDYAT AMIDESLDLQ SVNDPDNNHC NFLYTHQDLR FIQHHPFDGS GDFLVYKPEP 120 LALSLSSHNG THPLQKYEST GLDFCRTAVM TLGPYTGYAS ILKGSKFLKP TQQLLDEICD 180 VGFGVDCGLM TDPPSLENLR TTTSVDHPNC GSDTRKRSRL ISLLDEVYKR YKHYYQQIQA 240 VITSFETVSG LSSAAPFANL DLKAMSKNFR CLNNAITDQL QFSVKPHEHQ ISYRREELMW 300 SGSSNDGLYG QKAINNMGFV DHQPVWRPQR GLPKRAVTVL RAWLFDHFLH PYPTDTDKQI 360 LAKQTGLSRN QVSNWFINAR VRLWKPMVEE VHTLEARQVH KVSSHIQEQE TPPVISRDPS 420 HRRNQDPPSK RPRNDFSSEN RYSDHHIMER NKEHMNFYGN LSIHGANNGA NGNRGVSLTL 480 GLHQDNNAIT LSEPFRLNRE RFVISGLDAE NRQVGREIMG GQFLHDFGG

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MAEGFEPYHI PQQSRREKLR VVTTGCVGDL LPLYDQSSFI SSSPNLLSKQ PRNITSSLMA  60
TATSNSDYAT AMIDESLDLQ SVNDPDNNHC NFLYTHQDLR FIQHHPFDGS GDFLVYKPEP  120
LALSLSSHNG THPLQKYEST GLDFCRTAVM TLGPYTGYAS ILKGSKFLKP TQQLLDEICD  180
VGFGVDCGLM TDPPSLENLR TTTSVDHPNC GSDTRKRSRL ISLLDEVYKR YKHYYQQIQA  240
VITSFETVSG LSSAAPFANL DLKAMSKNFR CLNNAITDQL QFSVKPHEHQ ISYRREELMW  300
SGSSNDGLYG QKAINNMGFV DHQPVWRPQR GLPKRAVTVL RAWLFDHFLH PYPTDTDKQI  360
LAKQTGLSRN QVSNWFINAR VRLWKPMVEE VHTLEARQVH KVSSHIQEQE TPPVISRDPS  420
HRRNQDPPSK RPRNDFSSEN RYSDHHIMER NKEHMNFYGN LSIHGANNGA NGNRGVSLTL  480
GLHQDNNAIT LSEPFRLNRE RFVISGLDAE NRQVGREIMG GQFLHDFGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-109	TALE family protein