PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024978964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 783aa MW: 90861.8 Da PI: 7.1663 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.1 | 2.6e-22 | 145 | 240 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 k+Y++YA ++GF+vr++ +k++ ++gei +r+fvCs+eg++++++ + +e++ r+++ +r+gC+a++k++++k ++ +e++++++ HnH+ XP_024978964.1 145 KMYRTYADNAGFDVRMHVKKTN-KHGEIQTRWFVCSREGNPKKKDFDslymqpDERRYRNTNIKRCGCNACIKIHLTKdRACYEIYEFVEAHNHA 238 68*************9887776.8888****************99999***99999999******************98999************* PP FAR1 89 la 90 l+ XP_024978964.1 239 LF 240 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 783 aa Download sequence |
MENPIVKQLQ DNVNDKLNSG YEYGRNTIPD DEEDDQSVPI AAVFVYPLGC CVNVVVVHIG 60 AVHTKRMADH GHMNKDDSII VIPTLIPHPN YFVPSDLDSI TSSQQEVDYD IGESSDGIKF 120 FIPKVDDALK PNMKAQYATI NEVEKMYRTY ADNAGFDVRM HVKKTNKHGE IQTRWFVCSR 180 EGNPKKKDFD SLYMQPDERR YRNTNIKRCG CNACIKIHLT KDRACYEIYE FVEAHNHALF 240 NNNDCRFSRK NRQMKYTDFK TVLNSSSYKV DARRSHRIQT ALNGGFERTL ISEIDFKNFK 300 RDVVACVELS AIFWADEVAR INYKEFGDVI LFDGTFRTNK HAMIFVLFLA VDNHKASVVG 360 SALISGETID NFTSMFCNET SYSKGVHRIQ ALTMYVAHYE EGPFKEAXLT QVSVXLNHDT 420 TFNKVINKLV WNIHIGPSEF ERRWNEMVDK YNLAGDTWFT EMYEIRHSWI PXYYKNXXMS 480 GLMKTTSRSE SSNXYINIYE SYWFDLVQFL NNYDVAIEKQ RYRQSXHESV TRTTNPKFXT 540 PLXJERHASS IYSRNVFFDI QKEIKKXVXF CAIETVECRD DFKSFVISQT AKKSDDNISY 600 LVGXXYSTNT VECDCNLFTR NGYLCRHAFK VLINDEVECI PEKYVLRRWK RXLVPVQIQS 660 ARVRYGEVNX EKEKSIXELY SKXDBIISIX RNDQXILDRL GRNLEEFMVD IEKEVPYEDP 720 SQQKLDAIRD HLGVSIPDEV DILPPSGIRN KGCGTGKRLV SVSEKMQTNC KKAKRKCATC 780 WTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-48 | FAR1 family protein |