PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978863.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 364aa    MW: 39257.3 Da    PI: 7.8713
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.73e-394099261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +e++lkcprCds ntkfCyynnysl+qPryfCk+CrryWt+GGalrnvP+Ggg+rknkk+
  XP_024978863.1 40 PEQTLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTRGGALRNVPIGGGCRKNKKT 99
                    6899******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MSLDNITPSK QPNKDETQTS AGGGGGGGGG GRKASILKPP EQTLKCPRCD SPNTKFCYYN  60
NYSLTQPRYF CKTCRRYWTR GGALRNVPIG GGCRKNKKTR VSSSRYVNGD SSSKDSSLDI  120
GGLSLLSGPS PPAMDFQFAG INNNINIPPR LNHFSSSFGD LSNNPPPFIN LDSLGFNFPS  180
MKQDHHHHQP HGGLSNFQGM GVADNLHLNP TTNLASSIES LSSINQDLHW RLQQQRLATL  240
LGGTGSDDGG GGGGAGGEPD QQQQQNQIAI ESQSQKLQPI LFHNLEIPKP SMSSDVRKDG  300
SGSGGGLETE WFFDNNYAPV NVNPSTEMAP ADINTAGNYQ IGSINNWNIG MQAWNQFNQY  360
SPLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-54Dof family protein